Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02000 ATGGAAAAACAAATCCGGAACATACCCAGAATCCTTTGTCTCCACGGATTTAGGACCAGTGGTGAAATCCTCAAAAAACAAGTCTTACGTTGGCCTGAATCTGTAAAACAAAAATTGGACCTTGTTTTCCTCGATGGTCAATTTCCAGCACAAGGAAAATCAGATGTTGAAGGCATTTTTGATCCTCCTTATTATGAATGGTTCCAAGCCAATCAGGATTTCACTGAGTATAAGAACTTTGAAGAATGCTTAGTATACATTGAAAATTATATGCTAAAAAATGGTCCTTTTGATGGTGTTCTTGGATTCTCTCAGGGTGCATTTTTAGCGGCTGCAATGCCAGGAATGCAAGCACAGGGAGTAGCATTTCAGAAGATAAACAAGATCAAGTTCCTGATTCTGATATCAGGAGCTATGTTTGGGGGAATGAAGTATGGAACACCTAAACTAGCTTCCAATGCATTTTCAAAACCAATTGATTGTCCATCTCTTCATATTATAGGAGAGACAGATTTCATGAAACCAGAAAGCATTATTTTGCAAAAGGCTTTTGTTGATCCTGTTGTGATCCATCACCCAAAAGGGCATACAATACCAAGACTTGATGAAAAGAGTCTTGCAACTATGCTTGGTTTTATTGACACAATTGAGGGAATGCTATCAGATGGTCACAAAAAGAATTGA 684 0.3801 MEKQIRNIPRILCLHGFRTSGEILKKQVLRWPESVKQKLDLVFLDGQFPAQGKSDVEGIFDPPYYEWFQANQDFTEYKNFEECLVYIENYMLKNGPFDGVLGFSQGAFLAAAMPGMQAQGVAFQKINKIKFLILISGAMFGGMKYGTPKLASNAFSKPIDCPSLHIIGETDFMKPESIILQKAFVDPVVIHHPKGHTIPRLDEKSLATMLGFIDTIEGMLSDGHKKN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02000 227 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 222 - -
Trre10g02000 227 Gene3D alpha/beta hydrolase 5 217 IPR029058 -
Trre10g02000 227 FunFam esterase AGAP003155 5 220 - -
Trre10g02000 227 SUPERFAMILY alpha/beta-Hydrolases 7 200 IPR029058 -
Trre10g02000 227 Pfam Serine hydrolase (FSH1) 9 203 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02000 Trre-Chr10 19410210 19412059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02000 4 220 Sulfurtransferasese or Rhodanese AT1G09280 31.855 9.78e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02000 - - tpra:123903829 433.335