Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01998 ATGGAAAACCAAATGAGACCCAGAATCCTCTGCCTCCATGGATTCAGAACCAATGGTCAAATCCTCAAGAAATCAATATTCTCACGTTGGCCTCAAACTGTAATACAAAAATTGGACCTTGTTTTTCTTGATGCTCAATGTCTAGCTCATGGAAAATCAGAAGTTGAAGGCATTTTTGATCCTCCTTATTATGAATGGTTCCAAAGCAATGAGGATTACACAGAGTATAGGAACTTTGAGGAATGCATAGTATACATTGAGGATTACATGCTTAAAAATGGTCCTTTTGATGGTGTACTTGGATTCTCTCAGGGAGCTGTTGTAGCAGCTGCATTGCCAGGAATGCAAGCACAGGGAGTAGCATTTCAGAAGATAAGCAAGATCAAGTTCATGATTCTCATATCAGGAGCCCTATTTCGTGGGTTGAAGTATGGAAAACCTAAACTTGCTACCCATGCATTTTCAAAACCAATTGATTGCCCATCTCTTCACATTATAGGTGAGAAGGATTACTTGAAGCCAGAAAGCATGATTTTGCTAGAGGCTTTTGTCAACCCTGTTTTGATTCATCACCCAAAAGGACATGAAATCCCAAGACTTGATGAAAAGAGTCTTGGAACTCTGCTTAGTTTTATTGACACAATTCAAGGGACGCCATCATATGGTCATGATCTCTGCAGGCTATGA 687 0.3988 MENQMRPRILCLHGFRTNGQILKKSIFSRWPQTVIQKLDLVFLDAQCLAHGKSEVEGIFDPPYYEWFQSNEDYTEYRNFEECIVYIEDYMLKNGPFDGVLGFSQGAVVAAALPGMQAQGVAFQKISKIKFMILISGALFRGLKYGKPKLATHAFSKPIDCPSLHIIGEKDYLKPESMILLEAFVNPVLIHHPKGHEIPRLDEKSLGTLLSFIDTIQGTPSYGHDLCRL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01998 228 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 218 - -
Trre10g01998 228 Pfam Serine hydrolase (FSH1) 5 202 IPR005645 -
Trre10g01998 228 Gene3D alpha/beta hydrolase 3 217 IPR029058 -
Trre10g01998 228 SUPERFAMILY alpha/beta-Hydrolases 6 198 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01998 Trre-Chr10 19399844 19403024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01998 8 198 Sulfurtransferasese or Rhodanese AT1G09280 31.674 2.76e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01998 - - tpra:123903829 347.436