Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01978 ATGGATCCTTTCAGAGGATCCGAATCCGAACCCGAAAACCCGATCGCATCATGCATCACCATGCTCTCCCTCCGCAACTTCACCGCCTGCAGCGACTTCGCCCGCCGTTTACCTCTCTCCGATTCAATCGGCCGTATCCTCACAATCGCCGACGTCCTCTCCGCCCCCGACCACTACTCAGTCCTCCGTCTCCGCCGTTCCGAAGCCGTTAACCGTGACCTAGCTCGTCAACATTACGCTAAGTTCGCGATCCTTCTAGACCCTACAAGCACTGAGAAATTCCCCTTTCAAGATGAAGCCCTAGCACGTGTTCGTGAAGCTTGGCACGTGCTCTCTGACCCTGATCGCCGCGCCGTTTACGACCGTGGTGTTGTCGACATCGCCGCTACGTTTTGGACTGCGTGTCCTTATTGCTGGAATTTGTATCAGTATGAGAAGAAGTACGAAGGTTTTTCTCTCATGTGTCAGAGTTGTTCTAAATCTTTTCACGGTGTTGCTGTTAAACCGCCGGTGAAAGTTGGTGCTACGGTGATCGAAGGGGAAGAGCGGCGGCAGTATTATAAATGCCGTGCTAGAGTGCCATTGAAGTTTTATGAAGTGAAGGGGAGTGGTAATGAGAACATAATGGGTGAAAATTCTGCTGAATTTGTGTATGTTTCTGATGATGATGGTGATTGGGAGAAAGAATGGGGGAATGTGGGTGGTGGTGGTGGTGTTGTGGGAAATGAAGGTTTTGAGAAGGTGATTCAAGATGATCATCAAATGCAAGGGAACGAGAAACGGAAGACGAGGATGAAGACTGTGGCAAGGAAGAGTGTTATGAACAGAGTAACAAGATTTGATTTTGATAATAACTTGAATGTGGGTTTGGATGCTAAGGATTGTGAATTGGAGTTTACAGAAGGAGCTGATGATGTCTTCGTCGGGGTACGGTTCAATGGATGA 945 0.4868 MDPFRGSESEPENPIASCITMLSLRNFTACSDFARRLPLSDSIGRILTIADVLSAPDHYSVLRLRRSEAVNRDLARQHYAKFAILLDPTSTEKFPFQDEALARVREAWHVLSDPDRRAVYDRGVVDIAATFWTACPYCWNLYQYEKKYEGFSLMCQSCSKSFHGVAVKPPVKVGATVIEGEERRQYYKCRARVPLKFYEVKGSGNENIMGENSAEFVYVSDDDGDWEKEWGNVGGGGGVVGNEGFEKVIQDDHQMQGNEKRKTRMKTVARKSVMNRVTRFDFDNNLNVGLDAKDCELEFTEGADDVFVGVRFNG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01978 314 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 278 - -
Trre10g01978 314 Pfam DnaJ domain 57 121 IPR001623 -
Trre10g01978 314 ProSiteProfiles dnaJ domain profile. 57 124 IPR001623 -
Trre10g01978 314 Gene3D DnaJ domain 50 124 IPR036869 -
Trre10g01978 314 SUPERFAMILY Chaperone J-domain 50 124 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01978 Trre-Chr10 19133912 19134856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01978 9 216 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.455 1.68e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01978 - - tpra:123904328 583.948