Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01915 ATGTTTGTAAATGCGGGTGGGGAAGCGTTTAATGAAGAAGCTGGCGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTTGCAAAAATGATCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGGACTATGTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATTAGGGTGTTCGACGTATACATACAAGAAGAAAAGGCTTTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGACGGAGTTTTAGTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTATTAGTGGGATTTGCATTAGGAGAGCGACGACAGTTTCACCAATGACGAGTGATTTCGTTAAATGTAACGACTGTGCTGCGCTGATTGAAATTCCTTCATCACAGATGAAAGATATGAAGACAAAATCTACAGTGAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCGTGGATGTCATTAACTGAAACAAGTAGGAGAATGGAAATGATCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACTGAACAAACTCTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTATAACAGGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATTAGTTTACAAGAAAAAGTAAAGGTGATGAGGAGTGAACAATCTCGGCTTTCCCTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGAAACATCCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTCGATGCATCAAAAGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCCGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAGAGGAGTGAAACTTTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGACCTACATCAAAAAGGTTGGAGATGAAACAAAACTCTGAAGGCTATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAAAGTACTGCAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCATTGCATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCTGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACGCATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTAATGTTTGTACAAATAAGTCCATCAGATCAGGATGTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACCAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACTAGTGAACTTCAAAAGACAAAAGCAATGCTTGAGAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAATCATTGAGAATAAGGCCAAAGGAAAGGATCATGTCCACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCACGCAAAATCAATCAGAGAAACAAGTTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACAAAAGGACTCCAAAATCTCTGATGGCTGGATTAATGTGGATTGGTGCGAAGGACGGTAG 2340 0.3996 MFVNAGGEAFNEEAGGVKFLGDTFFDGGNVFCKNDPIVEGGDYPSIYQSARVGSFCYRIDNLSPGDYVVDLHFVEIINVNGPKGIRVFDVYIQEEKALSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVISGICIRRATTVSPMTSDFVKCNDCAALIEIPSSQMKDMKTKSTVKYENKIKELTVQCELKAKECYEAWMSLTETSRRMEMIQMELDQVTFKSLTTEQTLEKQAENLRSIYNRYELDKKKWAEAIISLQEKVKVMRSEQSRLSLEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEMKQNSEGYHHVPGVVEAKVDNICDVWKVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRSKDESMKKLEESLQIIENKAKGKDHVHKNLQEKIKELEGQIELKTSTQNQSEKQVSQLCEKLKGKEETCCTLQQKDSKISDGWINVDWCEGR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01915 779 Coils Coil 237 271 - -
Trre10g01915 779 Gene3D Kinesin motor domain 283 660 IPR036961 -
Trre10g01915 779 ProSitePatterns Kinesin motor domain signature. 558 569 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre10g01915 779 Gene3D - 1 151 - -
Trre10g01915 779 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 741 IPR027640 GO:0003777|GO:0007018
Trre10g01915 779 FunFam kinesin-like protein KIN-14R 286 660 - -
Trre10g01915 779 Pfam Kinesin motor domain 343 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 SMART kinesin_4 335 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 Pfam Malectin domain 2 144 IPR021720 -
Trre10g01915 779 PRINTS Kinesin heavy chain signature 559 577 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 PRINTS Kinesin heavy chain signature 608 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 PRINTS Kinesin heavy chain signature 410 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 PRINTS Kinesin heavy chain signature 528 545 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 Coils Coil 679 741 - -
Trre10g01915 779 CDD KISc_C_terminal 335 660 - -
Trre10g01915 779 ProSiteProfiles Kinesin motor domain profile. 337 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01915 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 295 658 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01915 Trre-Chr10 18069033 18073412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01915 309 711 Calmodulin-binding Proteins AT5G65930 41.220 1.53e-86 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01915 K10406 - gmx:100800016 1280