Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g01915 | ATGTTTGTAAATGCGGGTGGGGAAGCGTTTAATGAAGAAGCTGGCGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTTGCAAAAATGATCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGGACTATGTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATTAGGGTGTTCGACGTATACATACAAGAAGAAAAGGCTTTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGACGGAGTTTTAGTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTATTAGTGGGATTTGCATTAGGAGAGCGACGACAGTTTCACCAATGACGAGTGATTTCGTTAAATGTAACGACTGTGCTGCGCTGATTGAAATTCCTTCATCACAGATGAAAGATATGAAGACAAAATCTACAGTGAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCGTGGATGTCATTAACTGAAACAAGTAGGAGAATGGAAATGATCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACTGAACAAACTCTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTATAACAGGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATTAGTTTACAAGAAAAAGTAAAGGTGATGAGGAGTGAACAATCTCGGCTTTCCCTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGAAACATCCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTCGATGCATCAAAAGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCCGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAGAGGAGTGAAACTTTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGACCTACATCAAAAAGGTTGGAGATGAAACAAAACTCTGAAGGCTATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAAAGTACTGCAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCATTGCATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCTGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACGCATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTAATGTTTGTACAAATAAGTCCATCAGATCAGGATGTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACCAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACTAGTGAACTTCAAAAGACAAAAGCAATGCTTGAGAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAATCATTGAGAATAAGGCCAAAGGAAAGGATCATGTCCACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCACGCAAAATCAATCAGAGAAACAAGTTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACAAAAGGACTCCAAAATCTCTGATGGCTGGATTAATGTGGATTGGTGCGAAGGACGGTAG | 2340 | 0.3996 | MFVNAGGEAFNEEAGGVKFLGDTFFDGGNVFCKNDPIVEGGDYPSIYQSARVGSFCYRIDNLSPGDYVVDLHFVEIINVNGPKGIRVFDVYIQEEKALSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVISGICIRRATTVSPMTSDFVKCNDCAALIEIPSSQMKDMKTKSTVKYENKIKELTVQCELKAKECYEAWMSLTETSRRMEMIQMELDQVTFKSLTTEQTLEKQAENLRSIYNRYELDKKKWAEAIISLQEKVKVMRSEQSRLSLEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEMKQNSEGYHHVPGVVEAKVDNICDVWKVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRSKDESMKKLEESLQIIENKAKGKDHVHKNLQEKIKELEGQIELKTSTQNQSEKQVSQLCEKLKGKEETCCTLQQKDSKISDGWINVDWCEGR | 779 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g01915 | 779 | Coils | Coil | 237 | 271 | - | - | |
Trre10g01915 | 779 | Gene3D | Kinesin motor domain | 283 | 660 | IPR036961 | - | |
Trre10g01915 | 779 | ProSitePatterns | Kinesin motor domain signature. | 558 | 569 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Trre10g01915 | 779 | Gene3D | - | 1 | 151 | - | - | |
Trre10g01915 | 779 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 41 | 741 | IPR027640 | GO:0003777|GO:0007018 | |
Trre10g01915 | 779 | FunFam | kinesin-like protein KIN-14R | 286 | 660 | - | - | |
Trre10g01915 | 779 | Pfam | Kinesin motor domain | 343 | 657 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | SMART | kinesin_4 | 335 | 666 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | Pfam | Malectin domain | 2 | 144 | IPR021720 | - | |
Trre10g01915 | 779 | PRINTS | Kinesin heavy chain signature | 559 | 577 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | PRINTS | Kinesin heavy chain signature | 608 | 629 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | PRINTS | Kinesin heavy chain signature | 410 | 431 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | PRINTS | Kinesin heavy chain signature | 528 | 545 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | Coils | Coil | 679 | 741 | - | - | |
Trre10g01915 | 779 | CDD | KISc_C_terminal | 335 | 660 | - | - | |
Trre10g01915 | 779 | ProSiteProfiles | Kinesin motor domain profile. | 337 | 658 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre10g01915 | 779 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 295 | 658 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g01915 | Trre-Chr10 | 18069033 | 18073412 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g01915 | 309 | 711 | Calmodulin-binding Proteins | AT5G65930 | 41.220 | 1.53e-86 | 296 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g01915 | K10406 | - | gmx:100800016 | 1280 |