Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01902 ATGGATCCGATTCAACTCAACGATTTTCAAAATCACACACAAACCCTAATTTCAGACCTTCAAGATTCAGTTATGGAAGATTCTAACGACTCCATTTTCGATTCAATCCTCTGTGATTCCACTTCCAGACTCATTCCTACTGGATTCACCGCAAGATATGAAAACGCAGCAGAGGAGTGTGTCATGTTTGTAAATGCGGGAGGGGAAGCGTTTAATGAAGCAGCTGGTGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTTGCACTAATGATCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGGACTATGTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATTAGGGTGTTCGACGTATACATACAAGAAGAAAAGGCTTTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGATGGGGTTTTAGTCATAAGATTCGAAAGTATAAATGGAAGCCCAGTTATTAGTGGGATTTGCATTAGGAGAGCGACGACAGTTTCACCAGTGACGAGTGATTTCATTAAATGTAACGACTGTGCTGCGCTGATTGAAATTCCTTCATCACAGATGAAAGATATGAAGACAAAATCTATAGTGAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGTGAGGTCAAGGCAAAAGAATGCTATGAAGCGTGGATGTCATTAACTGAAACAAGTAGGAGAATGGAAATGATCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACTGAACAAACTCTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTCTAACAGGTATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTATTAGTTTACAGGAAAAAGTAAAGGTGATGAGGAGTGAACAATCTCGGCTTTCCCTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAGAGGAGTGAAACTTTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGACCTACATCAAAAAGGTTGGAGATAAAACAAAACTCTGAAGGCTATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAAAGTACTGCAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCATTGCATGCTATGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCTGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCGCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACGCATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTAATGTTTGTACAAATAAGTCCATCAGACCAGGATGTAGGCGAGACTCTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACTGGTGAACTTCAAAAGACAAAAGCAATGCTTGAGAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAATCATTGAGAATAAGGCCAAAGGAAAGGATCATGTCCACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCACGCAAAATCAATCAGAGAAACAAATTTCTCAATTATATGAAAAGTTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACAAAAGGTCAAAGAGCTTGAGAAAAAAATAAAAGAACAGCTGCAGTCGGAGACTGCAAATTTCCAGCAGAAGGTTTGGGATCTAGAGAAAAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTTCCTTTTTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCAGAAAGCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGAAGCAAACTCATTGTTATGTTGAAGCCGTAAAGATGACCGCCACACCTGACATAGCTAAAAGCCGCACAAGTGATGAATGTCCAAACGAGATTGAGACTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAAATAAGTCAAGACTCTGTTTTGATAAAAGGGAATGATTCTACTCATCAGATGAGAAACAAAAGGCAGCTCAGAAGCAACGAAATTGAGAACCATTTTGTTATGCCATCGTCCTCTTTACGCGATAGAAAAATCACAAGGAAATCCGACCCACCACCTAAAATTGTAAGGACCGGTAAGATAACAACAAAACCGACTGCCGTTGCTAGTCAAGCTCCTTTGTCTCATAAGAGAGCTAGCACTAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGACAGTAAGAAGAAAATATGGTCAAGATAG 3159 0.4014 MDPIQLNDFQNHTQTLISDLQDSVMEDSNDSIFDSILCDSTSRLIPTGFTARYENAAEECVMFVNAGGEAFNEAAGGVKFLGDTFFDGGNVFCTNDPIVEGGDYPSIYQSARVGSFCYRIDNLSPGDYVVDLHFVEIINVNGPKGIRVFDVYIQEEKALSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVISGICIRRATTVSPVTSDFIKCNDCAALIEIPSSQMKDMKTKSIVKYENKIKELTVQCEVKAKECYEAWMSLTETSRRMEMIQMELDQVTFKSLTTEQTLEKQAENLRSISNRYELDKKKWAEAIISLQEKVKVMRSEQSRLSLEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNSEGYHHVPGVVEAKVDNICDVWKVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTGELQKTKAMLEKARSECRSKDESMKKLEESLQIIENKAKGKDHVHKNLQEKIKELEGQIELKTSTQNQSEKQISQLYEKLKGKEETCCTLQQKVKELEKKIKEQLQSETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWKQTHCYVEAVKMTATPDIAKSRTSDECPNEIETRILCSSNSVNRQISQDSVLIKGNDSTHQMRNKRQLRSNEIENHFVMPSSSLRDRKITRKSDPPPKIVRTGKITTKPTAVASQAPLSHKRASTSRDQAQGVKERDSKKKIWSR 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01902 1052 FunFam Kinesin-like protein KIN-14R 56 211 - -
Trre10g01902 1052 Pfam Malectin domain 62 205 IPR021720 -
Trre10g01902 1052 SUPERFAMILY Tropomyosin 733 907 - -
Trre10g01902 1052 Coils Coil 740 816 - -
Trre10g01902 1052 MobiDBLite consensus disorder prediction 1034 1052 - -
Trre10g01902 1052 CDD KISc_C_terminal 396 721 - -
Trre10g01902 1052 MobiDBLite consensus disorder prediction 1014 1033 - -
Trre10g01902 1052 Coils Coil 832 852 - -
Trre10g01902 1052 MobiDBLite consensus disorder prediction 992 1052 - -
Trre10g01902 1052 Pfam Kinesin motor domain 404 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 756 IPR027417 -
Trre10g01902 1052 ProSiteProfiles Kinesin motor domain profile. 398 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 Gene3D - 56 212 - -
Trre10g01902 1052 SMART kinesin_4 396 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 Coils Coil 857 910 - -
Trre10g01902 1052 Gene3D Kinesin motor domain 341 721 IPR036961 -
Trre10g01902 1052 PRINTS Kinesin heavy chain signature 620 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 PRINTS Kinesin heavy chain signature 471 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 PRINTS Kinesin heavy chain signature 589 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 PRINTS Kinesin heavy chain signature 669 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre10g01902 1052 PANTHER KINESIN-LIKE PROTEIN KLP-3 67 801 IPR027640 GO:0003777|GO:0007018
Trre10g01902 1052 FunFam kinesin-like protein KIN-14R 347 721 - -
Trre10g01902 1052 ProSitePatterns Kinesin motor domain signature. 619 630 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre10g01902 1052 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01902 Trre-Chr10 17998050 18003650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01902 370 772 Calmodulin-binding Proteins AT5G65930 41.463 6.61e-85 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01902 K10406 - gmx:100800016 1621.29