Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01899 ATGCATCATGGATTGTATCAAAGTGGACAACATTTGGGTGTTGTTGGATTAGGTGGACTTGGTCATGTTGCAGTTAAGTTTGCTAAGGCTTTTAACATGAAAGTTACTGTGATAAGTACTTCTCCTGGAAAGAAAGAGGAAGCTTTGGAAAGACTTGGTGCTGATTCCTTCTTGCTTATCAATGATCAACAACAAGTACAGGAAGCGAAGGACACGATGGATGGCATCATAGACACAGTTCCAGGCCCTCACTCACTCCACCCATTAGTTGATATGTTGAAGACATGTGGAAAATTGATTTTAGTTGGTGCATCAATTACTCCTCCAGTCTTGCCATATATGCCTTTGATGTTTGGGAGGAAGATAATTGCTGGTAGTGCTGGTGGAGGATTGAAAGAGAGCCAAGACATGATTAATTTTGCCGCAAAGCACAATATCACAGCAGATATTGAAGTGATTCCTATGGATTATGTGAACACAGCTTTTGAGAGGCTTGCAAAGAATGATGTTAAATACAGATTTGTCATTGATGTGGCTAACACTCTTAACGTCTCTCATATTGATTAA 567 0.3986 MHHGLYQSGQHLGVVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKEEALERLGADSFLLINDQQQVQEAKDTMDGIIDTVPGPHSLHPLVDMLKTCGKLILVGASITPPVLPYMPLMFGRKIIAGSAGGGLKESQDMINFAAKHNITADIEVIPMDYVNTAFERLAKNDVKYRFVIDVANTLNVSHID 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01899 188 FunFam Putative cinnamyl alcohol dehydrogenase 6 149 178 - -
Trre10g01899 188 Gene3D - 2 148 - -
Trre10g01899 188 PANTHER ALDEHYDE REDUCTASE 2 181 IPR047109 GO:0016616
Trre10g01899 188 FunFam Cinnamyl alcohol dehydrogenase 1 148 - -
Trre10g01899 188 Gene3D - 149 178 - -
Trre10g01899 188 Pfam Zinc-binding dehydrogenase 19 141 IPR013149 -
Trre10g01899 188 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 146 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01899 Trre-Chr10 17954982 17956445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01899 2 183 Monolignol Biosynthesis Gene Families AT4G37990 64.286 1.59e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01899 - K23232 zju:107425058 273.092