Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01894 ATGACAGCACAATATGAAGTTGAGCATCCTAAGAAGGCTTTCGGTTGGGCAGCTAGAGATACTTCTGGTGTTCTCTCCCCTTTTAATTTCTCTAGAAGAGAAACAAGCGAGAAAGATGTAGCATTCAAAGTTTTATATTGTGGAATATGTCACTCAGACCTTTATAAGGTGAAGAATGAATGGGGCACTACCGACTATCCATTAGTTCCTGGACATGAGATTGTTGGCATAGTGACAGAGGTTGGAAATAAAGTGAGAAAGTTCAAAGTTGGAGACAGAGTAGGTGTTCTGGACTGGGCCTTAAGGCCCAACAGCAAAGGATTTCCATCCATCGCTACGACGAGCACGCACCATCGTCCGAGCATACATCGGCCAACGGTCAAAGATACCAAGCGTATCGTAACGGCCGACACCGGGATTATGAGCATTTAA 432 0.4468 MTAQYEVEHPKKAFGWAARDTSGVLSPFNFSRRETSEKDVAFKVLYCGICHSDLYKVKNEWGTTDYPLVPGHEIVGIVTEVGNKVRKFKVGDRVGVLDWALRPNSKGFPSIATTSTHHRPSIHRPTVKDTKRIVTADTGIMSI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01894 143 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Trre10g01894 143 Pfam Alcohol dehydrogenase GroES-like domain 38 96 IPR013154 -
Trre10g01894 143 SUPERFAMILY GroES-like 8 100 IPR011032 -
Trre10g01894 143 Gene3D - 16 96 - -
Trre10g01894 143 PANTHER ALDEHYDE REDUCTASE 6 97 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01894 Trre-Chr10 17928115 17930131 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01894 11 96 Monolignol Biosynthesis Gene Families AT4G37990 76.744 4.81e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01894 K23232 - mnt:21385909 174.096