Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01831 ATGGGAGATGTGGCTAAGGACCTTACTGCTGGGACTATTGGAGGGGCAGCACAGCTGATAGTCGGACACCCGTTTGACACCATAAAGGTCAAGCTCCAAAGTCAGCCGACACCACTTCCTGGCCAGGTTCCGAAATATTCTGGTGCAATTGATGCTGTCAAGAAGACAATAGCAGCTGAAGGTCCAGGCGGCTTATACAAAGGTATGGGAGCCCCGCTTGCTACAGTAGCTGCCTTCAATGCTGTCTTGTTTACAGTTAGAGGCCAAATGGAGACATTGTTGAGGTCACATCCTGGTGATGTCCTCACAATAAATCAGCAGGTTGTTTGTGGAGCGGCAGCTGGACTTTCTGTTTCCTTTCTAGCTTGCCCAACTGAACTTATCAAATGCAGGTTACAAGCACAAAGTGCACTAGCTGGTTCAGGAGCAGCAACATTGGCAGTGAAATATGGCGGTCCAATGGATGTGGCCAGGCATGTTCTCAGGTCAGAAGGTGGCGTAAAAGGTCTTTTCAAGGGCTTGATTCCCACTATGGCGCGTGAAATACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCAACTAAGCAATTAATTGCCGGAGGCACAGATACTTCTAAACTTGGTAGAGGTTCTCTGATGGCTTCCGGAGGCTTGGCTGGTGCTGCTTTTTGGTTAATGGTTTATCCAACCGATGTTGTTAAGAGCGTGATTCAAGTTGACGATTATAAAAATCCAAAATTTTCTGGTTCAATTGATGCTTTCAGAAGGATAAAAGCTACTGAGGGAGTTAAAGGCCTGTATAAAGGTTTCGGTCCTGCGATGTTCAGAAGTGTTCCTGCCAATGCAGCATGCTTCTTGGCGTACGAGATGACGAGATCAGCTTTGGGATGA 894 0.4687 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAEGPGGLYKGMGAPLATVAAFNAVLFTVRGQMETLLRSHPGDVLTINQQVVCGAAAGLSVSFLACPTELIKCRLQAQSALAGSGAATLAVKYGGPMDVARHVLRSEGGVKGLFKGLIPTMAREIPGNAAMFGVYEATKQLIAGGTDTSKLGRGSLMASGGLAGAAFWLMVYPTDVVKSVIQVDDYKNPKFSGSIDAFRRIKATEGVKGLYKGFGPAMFRSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01831 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Trre10g01831 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Trre10g01831 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Trre10g01831 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Trre10g01831 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Trre10g01831 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Trre10g01831 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Trre10g01831 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Trre10g01831 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Trre10g01831 297 Pfam Mitochondrial carrier protein 104 200 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01831 Trre-Chr10 17041324 17043510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01831 22 296 Antiporters AT1G79900 32.740 1.85e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01831 K15109 - gmx:100781634 519.235