Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01810 ATGGCTATTGATAACCAAGACAACACTACCACTGTCAGAGAAATCAAGCCTAAAAATAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGATGGTGATAATAGATGGCCACCATGGTTGAAACCTTTGTTGAAAGAGAATTTCTTTGTTCAATGCAAATTACATGCTGATTCTCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGTCCTCTTTGTTCTCTTTGTCTTGCTTATCACAAAGATCACCGTTTTATTCAGATTAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAAGTGTTGGACATAACTGGTGTTCAAACATACATTATCAATAGTGCAAGAGTTGTGTTTTTGAATGAAAGACCTCAACCTAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAAAGGAGCCTTCTTGATTCTTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTAGGAACATCTAAGAATTTCAAGAAAACAAAGAAACAATTAGCAGTAATGGCATCAGATTCTGAGGATTCATACAGCAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTCACACCATCTACACCACCTCCAACTTCAGTTAATTACAAAACAGCCAAAAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGTATTTTTAGATAATTGGTATTTTTAA 726 0.3733 MAIDNQDNTTTVREIKPKNRRIMGAGGPDDDGDNRWPPWLKPLLKENFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRFIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFKKTKKQLAVMASDSEDSYSSNNIHSRQKKIKVQSFTPSTPPPTSVNYKTAKRRKGIPHRAPLGVFLDNWYF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01810 241 CDD Bbox2 52 91 - -
Trre10g01810 241 MobiDBLite consensus disorder prediction 188 216 - -
Trre10g01810 241 MobiDBLite consensus disorder prediction 17 36 - -
Trre10g01810 241 MobiDBLite consensus disorder prediction 188 222 - -
Trre10g01810 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 31 232 - -
Trre10g01810 241 Pfam PLATZ transcription factor 92 163 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01810 Trre-Chr10 16685249 16687075 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre10g01810 PLATZ 4.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01810 - - gmx:100791221 426.402