Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01787 ATGTGGGAACAACTTGAATCTAATGGTGTGGTGATTTCTAAGTATCAATATGTTCGCCGCATATGGAGTTTTTTCGCTGAATTGAATGAAGGTTTGACAAGAGAGCTTGCTGAATTGAAAGTTGAGGATGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCGTGTCATTGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAAATACTATATTTGTCAGTCAAATTAAGCCTTGCCCCATATTGTCCAAAAAGGCTTTATACTGTGTCTCTATAATGACATTGAATACAGGGAATGTTGATACCATGTTAGCTTGGTACTCAAGTAAGAAGGCTGCTGGACTTGGTCCCGATCTTCAAATGTTCGAATCAGTTATATCATGTTGTGTTAATTCAAAACACTTTGAGATTGCTGGTAGAGTTTTTGAAGAAATGATGATTGGGTCTGCATCAAGCTCAACACAAAAATTAAACCTTAAAATGGCATCACTATCATTATCAAAGTGTAGCAGATTCGAGAATGCAATGATATTGTACCAGTTCTCAAACTACAAGGAAACTCACGAGGATGCTGTTGAAGGAGATGGTTCAACCAATGACGATGCAGTGCAGTCCCCCTTTACACCAAGTGAAGATATTGTTATCACTAATCCAGTTCAGGCTTCTGCAACCAAGACTGTTGGATTATGTTGCAATTGCAAAGGATACCAAAATGCCATGTGTGAATATCGAGGATGCCGAGTGATTGTCTTGGTGGTGGCTGTTCTATTTGTCAAGCATGATTTTGTTTGGTCGAGTGATTATCGTGGTGGTGGCTATTCTCTCTGTCTTTTGATGTTTTACATCTTTATGTATTTTGAACTTACCTATGTCTTGATGTTTCCATCCTTTTATCTATTTTGGTTTCTACTTGGATTTTGA 942 0.38 MWEQLESNGVVISKYQYVRRIWSFFAELNEGLTRELAELKVEDEEIEMLLENYLQRCESCHCQAERLLDSAREMENTIFVSQIKPCPILSKKALYCVSIMTLNTGNVDTMLAWYSSKKAAGLGPDLQMFESVISCCVNSKHFEIAGRVFEEMMIGSASSSTQKLNLKMASLSLSKCSRFENAMILYQFSNYKETHEDAVEGDGSTNDDAVQSPFTPSEDIVITNPVQASATKTVGLCCNCKGYQNAMCEYRGCRVIVLVVAVLFVKHDFVWSSDYRGGGYSLCLLMFYIFMYFELTYVLMFPSFYLFWFLLGF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01787 313 Gene3D Magnesium transport protein CorA, transmembrane region 25 82 - -
Trre10g01787 313 Coils Coil 29 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01787 Trre-Chr10 16376152 16380711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01787 52 121 MRS2 Gene Family AT5G22830 42.105 3.35e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01787 K16075 - ccaj:109813006 92.8189