Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01777 ATGGTGATGAGTGAAGGAGCAAGTGTAACAACAGCAATGGTTGCAGTTCAGTTCTTGGAAGTAGGTGGTGACACTCTAATGAAATCAGCCACCAAAGATGGAATGAGTATTTATATCTTCGTTTTTTACTCAAACCTTTTTGCTCTCTTTTTTCTTCTACCAACCACTCTCTTCTACCATAGGAAAAGAGCTCCTCCTCCAATTTCAATATCAATTTTATTCAGAATATTTCTTCTTAGTTGTTTCAGAACTACAGTGCAAACTTTGATGTATATTGGAATTGGATATAGCTCTCCTACGTTGTCATCTGCTATGGTTGATCTTGTCCCTGCTTTCACCTTCATACTTGCTTTAATTTCAAGGATGGAAAATCTAAATTTGAAACAACATAGCAGTCAAGCAAAAGTTATTGGTACATTGGTCTCCATTGGAGGGGCATTAATTGTGACATTGTACAAAGGGATACCATTGATTAGTGATGCCTTTCAAAATATAGAAATGGGAGCAACTGGAATTTACTTAACAAGGAAATCAGATTGGATAATTGGTGCTTTTATTCTTGCAATTGCTAGCTTTTGCCTTTCTGTTTTATTTATTATCCAGACTTGGATTGTAAAGGATTATCCAGAAGAGCTGGTGGTAACAACCATTTGTTGCATTTTGGTGGTAATCTTATCTGCCATTGTAGCTCTCATTGCAGAGGAAAATTCAAATGTTTGGATACTCAAACCTGATAAAGAGTTGCTATCTATGTGTTACTCTGCAATTTTTGTGGTATCAACGAGGAATACTGTAACCACGTGGGGATGTCGTATTAAAGGACCAATATTTGTAGCTATGTTCAACCCTTTAAGAGTGGTCATTGCACTTGGCTTGGGGGTCTTATTTTTGGGCGACAATCTTTATCTTGGAAGCATTATTGGAGCTACTATAATAGTTATTGCATTTTATGGTGTAATGTGGGCACAAGTTCAAGAGAAACACATCACAATCACAAGTGAAAATAATTTTCAACCATCTTCTTTGGCCCCTTTATTGGAAAACAAAAGCATGGATCTCTAG 1062 0.3663 MVMSEGASVTTAMVAVQFLEVGGDTLMKSATKDGMSIYIFVFYSNLFALFFLLPTTLFYHRKRAPPPISISILFRIFLLSCFRTTVQTLMYIGIGYSSPTLSSAMVDLVPAFTFILALISRMENLNLKQHSSQAKVIGTLVSIGGALIVTLYKGIPLISDAFQNIEMGATGIYLTRKSDWIIGAFILAIASFCLSVLFIIQTWIVKDYPEELVVTTICCILVVILSAIVALIAEENSNVWILKPDKELLSMCYSAIFVVSTRNTVTTWGCRIKGPIFVAMFNPLRVVIALGLGVLFLGDNLYLGSIIGATIIVIAFYGVMWAQVQEKHITITSENNFQPSSLAPLLENKSMDL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01777 353 PANTHER WAT1-RELATED PROTEIN 10 332 IPR030184 GO:0016020|GO:0022857
Trre10g01777 353 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trre10g01777 353 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020
Trre10g01777 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01777 Trre-Chr10 16213827 16230356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01777 11 352 Nodulin-like Gene Family AT3G28050 42.254 1.44e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01777 - - gmx:100793168 413.305