Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01740 ATGACGGCAACAACAACAAATGCAGAAGAACAAGAAGCAGCACGTCTCAAATCACTAGCAGAATCAAAATACAAAACAACCAAAAACACAAAATCGGCACTCAAATACGCCAAAAGAGCACAACGCTCAGCACCACACTTACAAGGAATCTCAGACTTAGTTACCTCTCTTAACATCCTATCTTCTCCCGATTTCTACGCCGTTCTCGACGTCGAACCCACCGCCACAATCACCACCATTCATAAACACTACAAAAAACTCTCTTCACTTCTTCACCCAAACAATAATCGCAACCACGTTGCATCTTCTCAAGAAGCCCTCAAACTTGTTACTGACGCTTTCAGCATTTTATCTGATAGAAAGCTTAGAGAAGATTACGACAGTAAACTTGATCTTGAGATAAGAGAAAAGGTAAGGACTTTTTGGACTGCTTGTGATACTTGCAGGGTTTTGCATCAGTTTGAGAGAAAGTATTTGGGTCATAAACTTGTTTGTCCTGGTTGTGATAAGAGTTTTAAGGCTATTGAAGCTGTTCAGAGTGATGGGTCCGATGAAGATGATGAAGAAGATAATACTTTGGGTGATTTTATGTTGAAGAGGAAGAATATGAAAAAGAAGAATGGAAAAATGGGTTGTGAAAAAGATGAGATTTTTAAGGGTTATGATGAAGTGGGTGATGAAAAAGATGAGATTTTTAAGGGTAATGATGAAGTGGGTGATGAAATAGGTGAGAGCTTTAAGGGTAATGGTGATGTGGGTGGTGAGAGCTTTAAGGATAATGATGAAGTGGGTATTGCTGGGAGATTGAGGAAGAGAACGCGTTCAGTTGGGGAGGTTTTAGAATGTTCTGAATCCAAGAGGGTTGTTGGGAGTGAAGAGGAAACAATGACATTGGCTGAATTTCAATCTAAAGTGAAGACTAAGAAAAAAGATCAGAAAGGGAAGATGAAGGGATTGGAGATTAAGAAGGGTTTTGCTGTCGAGGAGAAGAAGAATGAGGGTTCTGTGAAGAGAACTGGGTTGATTCTTGAGAGACATAGGGATACTAGTGGTGAGGAATTAGAAGTTATGGCGGTTGCGGATTCGGATTTTTATGATTTTGATAAAGATAGAGTGGAGAGGAGTTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGATGATGATGGAATGCCGAGGAGTTATGCTTTGATTGATGAAACTGTTTCGGTGAATCCTTTTAAAGTGATGATAAGTTGGTTGGATTTCCAGAACAATGGGGATGGAATGACTGTTAGTAGGGAGAAATTAGGGTTTCACATACCTTGTGGGAAATTTAAAGTTGCTAAGAAGGCTTCCATAAGTTCTGTAAATGTGTTCTCTCATGTTGTGGATTGTGATCGAGCAGCGCGTGAGGTTTACAAAGTTTATCCTAAGAAGGGTTCGGTTTGGGCGCTCTATAGTGAGGCGAGTCTTGATGCCGGTGAGGGCAATAGATGCTATGATATTGTTGTGTTTTTGACAAGTTACAGTGAGATGAATGGTATGAGCATGGCATTTCTCGAGAAGGTTGATGGTTACAAGACAGTGTTTAAGAGACAAGAGAGTGGGAGTCCCGCTGTTAGATTTCTTGGGAAGGAGGAATTTGGGCTAATTTCTCATCTGATTCCTGCGAGAAAATTTCCTTGTGATGAGGCTCCTGAATTGTTGAAAGACTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCGGATTTACTTACTGTTGGCGGCATAGATAATTGA 1761 0.4066 MTATTTNAEEQEAARLKSLAESKYKTTKNTKSALKYAKRAQRSAPHLQGISDLVTSLNILSSPDFYAVLDVEPTATITTIHKHYKKLSSLLHPNNNRNHVASSQEALKLVTDAFSILSDRKLREDYDSKLDLEIREKVRTFWTACDTCRVLHQFERKYLGHKLVCPGCDKSFKAIEAVQSDGSDEDDEEDNTLGDFMLKRKNMKKKNGKMGCEKDEIFKGYDEVGDEKDEIFKGNDEVGDEIGESFKGNGDVGGESFKDNDEVGIAGRLRKRTRSVGEVLECSESKRVVGSEEETMTLAEFQSKVKTKKKDQKGKMKGLEIKKGFAVEEKKNEGSVKRTGLILERHRDTSGEELEVMAVADSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRSYALIDETVSVNPFKVMISWLDFQNNGDGMTVSREKLGFHIPCGKFKVAKKASISSVNVFSHVVDCDRAAREVYKVYPKKGSVWALYSEASLDAGEGNRCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRQESGSPAVRFLGKEEFGLISHLIPARKFPCDEAPELLKDCWELDPASLPSDLLTVGGIDN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01740 586 CDD DnaJ 64 119 IPR001623 -
Trre10g01740 586 ProSiteProfiles dnaJ domain profile. 64 130 IPR001623 -
Trre10g01740 586 PANTHER BNAC03G44070D PROTEIN 8 575 - -
Trre10g01740 586 Pfam DnaJ domain 64 127 IPR001623 -
Trre10g01740 586 SMART dnaj_3 63 122 IPR001623 -
Trre10g01740 586 PRINTS DnaJ domain signature 66 84 IPR001623 -
Trre10g01740 586 PRINTS DnaJ domain signature 84 99 IPR001623 -
Trre10g01740 586 PRINTS DnaJ domain signature 102 122 IPR001623 -
Trre10g01740 586 Pfam Domain of unknown function (DUF3444) 356 554 IPR024593 -
Trre10g01740 586 SUPERFAMILY Chaperone J-domain 56 130 IPR036869 -
Trre10g01740 586 Gene3D DnaJ domain 56 146 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01740 Trre-Chr10 15501558 15503318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01740 6 179 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.922 1.28e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01740 - - tpra:123909844 1026.16