Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01735 ATGGGCAACAGTGAGATGGATAAAACTGCAAAAGAGAAAGAGTTGAAGACGCCGCCACCAACATCACAGGAGCAGCCTTCGACCACCACAAGCACCGGAGCAATTAATAATGACTGGGCCAGCTTTCAGGCATATTCTCCTATGCCTCCTCATGGATTCATGGCGTCAAGTCCCCAAGCTCATCCTTATATGTGGGGTGTCCAGCACATTATGCCTCCTTATGGTACTCCGCCACACCCTTATGTTGCAATGTATCCCCATGGTGGCATATATGCACATCCATCCATGCCTCCGGGATCTTATCCGTACAATCCTTATGCCATGCCTACTCCAAACGGTGTTGCTGAGGCTTCTGGAAACACACCTGCCAGCATGGAAACTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAACATGATTACAGGGAAAAATAATGAACATGGTAAAACCGCGGGGACATCTGCCAATGGAATTCACTCAAAGAGTGGTGGTGAAAGTGGAAGTTTTGAGGGTACTAGTGAAGGAAGTGATGCAAATTCTCAAAATGACTCTCAATTGAAATCCGGCGACAGGCGGGATTCTTATGAAGGTGAACCGTCTCAAAATGGCAGTTCAGCGCATATTTCACAAAATGGAGGACTTAATGCATCTCATACAGTAGTTAATCAAAGTATGTCTGTCATTCCTATCTCTGCGAGTGGTGCTCCTGGAGCTGTTGCTGGTCCTGCAACAAACTTAAATATAGGAATGGATTATTGGGCAACACCGACTTCATCCAACATTCCTGCTATCCGTGGAAAGGTGCCATCTACTACAGTTGCGGGAGGGGTGGTTACTGGTGGATCACGGGATAGTGTCCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAACAGTCCAATAGGGAATCTGCTCGGAGATCCAGGCTGCGCAAGCAGGCTGAGTGCGATGAGCTTGCTCAGCGTGCTGATGTTTTGAAAGAAGAAAATGCTTCACTCCGATTAGAAGTAAGTCGCATTAGAAGCGAGTATGAACAGCTACTTTCCGAGAATGCAGCGCTCAAGGAGAGACTCGGGGAACAACCTGGGAGCGATCAACACGTGCGTAACGACACTCAACAGAGTGGTAAAACAGAGGATGTGCAGGGTGGTCATTAG 1215 0.4716 MGNSEMDKTAKEKELKTPPPTSQEQPSTTTSTGAINNDWASFQAYSPMPPHGFMASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPYNPYAMPTPNGVAEASGNTPASMETDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTAGTSANGIHSKSGGESGSFEGTSEGSDANSQNDSQLKSGDRRDSYEGEPSQNGSSAHISQNGGLNASHTVVNQSMSVIPISASGAPGAVAGPATNLNIGMDYWATPTSSNIPAIRGKVPSTTVAGGVVTGGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRLEVSRIRSEYEQLLSENAALKERLGEQPGSDQHVRNDTQQSGKTEDVQGGH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01735 404 Gene3D - 311 380 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 211 226 - -
Trre10g01735 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Trre10g01735 404 Coils Coil 328 376 - -
Trre10g01735 404 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 392 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre10g01735 404 MobiDBLite consensus disorder prediction 310 332 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 116 226 - -
Trre10g01735 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Trre10g01735 404 MobiDBLite consensus disorder prediction 19 38 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 1 38 - -
Trre10g01735 404 SUPERFAMILY Leucine zipper domain 311 367 IPR046347 GO:0003700|GO:0006355
Trre10g01735 404 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Trre10g01735 404 MobiDBLite consensus disorder prediction 384 404 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 147 198 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 1 18 - -
Trre10g01735 404 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Trre10g01735 404 Pfam Disordered region downstream of MFMR 136 275 - -
Trre10g01735 404 MobiDBLite consensus disorder prediction 372 404 - -
Trre10g01735 404 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Trre10g01735 404 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01735 Trre-Chr10 15414516 15419245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01735 1 398 bZIP Transcription Factor Family AT2G35530 61.071 1.03e-160 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre10g01735 MFMR_assoc 6.9e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01735 K09060 - gmx:778122 654.825