Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01687 ATGGCAAAGAAACCGGAAACAAACGTTAAAGAACTCAAACCAGATCTAGAAGAGTCAACAACTCAATTTCGTTCTCTTCTCTGCAATAAAGAATACCATACAGCTACTACTGTTTATGCCGAAATAACTCTAGCAGCTACTCACCCACTTCATCGGCGTAAGGGGGCGTTAAGAGCATTGATGGTGCAACTTGAGAAAGTCCTAAAGAAGCTGAAAGTAAACAAATTCATTTTACCTTCTCTTCCTCGCTCTATACATATATGGCACCAAAAAATTGGATTCGCTACAGTTCCTTCGTGGGAGTTGACACTTTTATAG 318 0.3994 MAKKPETNVKELKPDLEESTTQFRSLLCNKEYHTATTVYAEITLAATHPLHRRKGALRALMVQLEKVLKKLKVNKFILPSLPRSIHIWHQKIGFATVPSWELTLL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01687 105 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 37 100 IPR016181 -
Trre10g01687 105 Gene3D - 18 98 - -
Trre10g01687 105 Pfam Acetyltransferase (GNAT) family 28 94 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01687 Trre-Chr10 14888282 14889861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01687 40 94 PHD Transcription Factor Family AT1G05380 34.545 3.57e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g01687 Acetyltransf_1 9.1e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01687 - K07411 dcr:108205181 39.6614