Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01674 ATGCAGAGAATTTCTGAAATTGATTTAAACGTGTTAGCTTCAATTCAAGATCCCTCTGAGAATAACAGCATGGAAGATCAACAACAACAGCAACAGAATCTTGACACTGATATGGTTGAGTCTGGTAGTGACGCCACTGTGATTGTAAACTCTAATGAAAATAATCGCTTAATTCAAGTTGAGTTACTACCTGAAGAAAATCATGCTGTTGCAAATAGAGAGCGTAGAGAAAGAGTACATTGGTCAGAAGAAGAACATAGGTTGTTTCTGCGAGGACTAAACAAACATGGTAAGGGACGTTGGAAAGACATTTCAAAAGATTTTGTGCCGGGAAGAACTCCAGCTCAAATTGCTAGTCATGCTCAAAAATACTTTAAACATCAAAAAGAAGCCGCGGAAAAACGGAGGAATAGGAGAACAAGTATTCATGACATAACCGTCGACAACAATGTTACAATAGCCAGTCTCCCTAGTGCACAACAAATTGAGATTCCTTCAATTGAACAACAAAATGAAATTCCTCAATTGACCATTCCCTCTATTGAACAACAACAGCTTGAGATTCCTTCAATTGAACAGCAAAATAAGATTTCTCCTTTGGTCACTGTTCCTAATGAACAACAAAATGAGAATATTTCTCCTTTGGTCACTGTTCCTAATGAACAACAAAATGAGAATATTTCTCCTCACAGCACAACCTTAAATGACAACAACAGTGGCAACTTGGTCACTCCTTCCATTGAGCCATTTCAAGAAGTGCAGGGAGTAAAACTTGCGTACAAAATTGAGTATGAAATTACGCCTGAGAATATGAAGAATGTCATTAAGGTGTGTGAGTTGTTGGAAAAGAACTTGAAAAGTTGA 864 0.375 MQRISEIDLNVLASIQDPSENNSMEDQQQQQQNLDTDMVESGSDATVIVNSNENNRLIQVELLPEENHAVANRERRERVHWSEEEHRLFLRGLNKHGKGRWKDISKDFVPGRTPAQIASHAQKYFKHQKEAAEKRRNRRTSIHDITVDNNVTIASLPSAQQIEIPSIEQQNEIPQLTIPSIEQQQLEIPSIEQQNKISPLVTVPNEQQNENISPLVTVPNEQQNENISPHSTTLNDNNSGNLVTPSIEPFQEVQGVKLAYKIEYEITPENMKNVIKVCELLEKNLKS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01674 287 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Trre10g01674 287 PANTHER TRANSCRIPTION FACTOR KUA1 62 237 - -
Trre10g01674 287 SMART sant 77 127 IPR001005 -
Trre10g01674 287 Pfam Myb-like DNA-binding domain 78 125 IPR001005 -
Trre10g01674 287 NCBIfam myb-like DNA-binding domain, SHAQKYF class 77 128 IPR006447 GO:0003677
Trre10g01674 287 ProSiteProfiles SANT domain profile. 81 129 IPR017884 -
Trre10g01674 287 MobiDBLite consensus disorder prediction 16 41 - -
Trre10g01674 287 Gene3D - 79 131 - -
Trre10g01674 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 129 IPR017930 -
Trre10g01674 287 SUPERFAMILY Homeodomain-like 75 130 IPR009057 -
Trre10g01674 287 CDD SANT 81 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01674 Trre-Chr10 14808316 14810435 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre10g01674 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01674 - - tpra:123907621 300.056