Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01658 ATGCTGGAGAAATTTATTTCGTGTATCTGGTCTAATAAGAACCGTAAAATTCTTCCTGTTGAATGCAAAGCTGTTACCACGTCGCCTGAATTAGCAATTCGTGTCGTTGTTAAATGTTGTATGCAGATAAACCTCCGGTCGATTTTGCCGTTCCCAGATAAACCTTTCGGAGATGGTGTTTTTGAGGTTCCTGCTTTTCTAAATCCAATGGAGACTAGCTCTGTAGAGATGATTTTGATTGATGAGAAGAATGTGAAGGGTGTATACCAATGGAGGAAATATGGGCAAAAGGTGACAAAATATAACCCTTGTCCCAAAGAAAAGAAGATATCCCAGAGGCTGAAGCTTTTAAAAATCAAATTGTTGTCCATTGAAAGTGATAGCACCGTTCCATTGATTGTTGTTCCAAGTCCCTTAAGTTTACCTATTCATGAACCTATTGAGGAGACTAAAAGGGATGTTGCAGTCAATCTTCAGAAGAACCTGACTAAAGTTTTTGATGGGGTTGCTGAGCGAAAATCAAGCAAACGTCTCACACCTGTCAAAATTGAGGAGTGA 558 0.3943 MLEKFISCIWSNKNRKILPVECKAVTTSPELAIRVVVKCCMQINLRSILPFPDKPFGDGVFEVPAFLNPMETSSVEMILIDEKNVKGVYQWRKYGQKVTKYNPCPKEKKISQRLKLLKIKLLSIESDSTVPLIVVPSPLSLPIHEPIEETKRDVAVNLQKNLTKVFDGVAERKSSKRLTPVKIEE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01658 185 SUPERFAMILY WRKY DNA-binding domain 83 106 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g01658 185 Gene3D WRKY domain 75 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g01658 185 ProSiteProfiles WRKY domain profile. 80 106 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01658 Trre-Chr10 14571619 14574170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01658 61 106 WRKY Transcription Factor Family AT1G55600 42.000 7.43e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01658 - - mus:103985161 44.669