Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01652 ATGGCTGCTCCAACATCAACCTCTCTCTTGAAAATGGAGAATATACCTAACAAAGGTAGAGGCCTTATTGCAGCACAAGATCTCAAAGCTGGCCAAATAATCCTCACTGAATCCCCTCTCCTTCTCTACTCTGCTTCACCTCTCTTCATTCCTACACCCTCCCCTTACTGTCACCACTGCTTCAGAACCTTACAACCTTCACAAACATTTCCATGTCCTTCTTGCTCAAACTACAATTTCTGCAGCCAAAAATGTCTCTCCATTGCTCTCAACTCCTCTCACTCTCCTTGTACATGTCAAACACTCTCTCATCTTCAAAACCCCACTTCACCATTATTAGAAAAACCCTTTGAACTTCAAGTTCAAGCTCGTTTCATTGTAGCTGCTTACAATCTTGCTATTCACACCCCTTCAATTATTCAAATTATACTTTCTCTTCATGGTGATCCTAATGATCATTATTCTATAGTTGATAATGCTATGTTTCTTCATTCTCTTATCTCACCTTTTTGTCCACCAAACATGAACAACTTATCAGCTGAATTAGCTGCAAAACTCATTGCTAAAGAAAGATTAAACTCTTTTTGCTTAATGGAACCTTACTCACCAAAGGGTCCTCAGAGATCTATTAAGGCTTATGTAATTTACCACACCACTTTTTTTAACCATGATTGTATTCCTAATGCATGCAGGTTTGATTATGTGGAAAATGGTGAACCTGGTGATGAACATAATACTGATATTGTTATTAGGTTGATTCAGGATGTTTCTGTTGGAAGTGAGATTTGTATAAGCTATTTTAGGATTAATAAGGATTATTTAACAAGGAAAAGGATTTTGATGGAGGATTATGGTTTTACTTGTGCATGTGATAGGTGTAAGATTGAAGCAAATTGGCATGATGGAGAAAATAACAGTGATCTGCCACATGTGATTTTCTTGTCCAAGTTTGTTTGTGATAAGGAGAATTGTGCTGGCACTTTGGCTCCTCTGCCTCCAAAAGATGGTGAAAAATCTAATGTTCTTGAGTGTAACTTTTGTGGTAATTTGAAAGTTGACTCTAGTGCTTAA 1071 0.3744 MAAPTSTSLLKMENIPNKGRGLIAAQDLKAGQIILTESPLLLYSASPLFIPTPSPYCHHCFRTLQPSQTFPCPSCSNYNFCSQKCLSIALNSSHSPCTCQTLSHLQNPTSPLLEKPFELQVQARFIVAAYNLAIHTPSIIQIILSLHGDPNDHYSIVDNAMFLHSLISPFCPPNMNNLSAELAAKLIAKERLNSFCLMEPYSPKGPQRSIKAYVIYHTTFFNHDCIPNACRFDYVENGEPGDEHNTDIVIRLIQDVSVGSEICISYFRINKDYLTRKRILMEDYGFTCACDRCKIEANWHDGENNSDLPHVIFLSKFVCDKENCAGTLAPLPPKDGEKSNVLECNFCGNLKVDSSA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01652 356 CDD SET_SMYD 192 293 - -
Trre10g01652 356 Pfam SET domain 19 266 IPR001214 GO:0005515
Trre10g01652 356 Gene3D SET domain 21 294 IPR046341 -
Trre10g01652 356 SMART set_7 8 273 IPR001214 GO:0005515
Trre10g01652 356 Gene3D - 109 194 - -
Trre10g01652 356 SUPERFAMILY SET domain 9 291 IPR046341 -
Trre10g01652 356 Gene3D - 56 108 - -
Trre10g01652 356 ProSiteProfiles SET domain profile. 8 267 IPR001214 GO:0005515
Trre10g01652 356 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 303 354 IPR044238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01652 Trre-Chr10 14516362 14518857 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre10g01652 SET 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01652 - - cam:101515628 524.628