Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01645 ATGAGGCATCTTTACTACACAGCTTTGTGTTTGGAGAAGGGGTTGGAATGCGTAGTGCATTCATTATTTAAAAGCTCTATTTTGGCACTCTTGGTACTTCCTCAATCTGTTTGGCTTAAGAGGATTGTTTCAGTGTCGCTCTTGGTAACATTGAGCATTCATTATTTAAAAGCTCTATTTTGGCACTCTTGGTACTTCCTCAATCTGTTTGGCTTAAGAGGATTGTTTCAGTGTCGCTCTTGGAGGTTTGCTGCAAAAATTGTTGCAGGCACACAAAAATCTAATGCTGAGGGAACTACCAAGAGGTCAAACTTGGGAATTTCAAATGGATTGACTGTGGAAGATCAGCCAGTGCCAATGGCTTTAGAGCAAACAGAACCAATGCTTGTTGGATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATGGAAGAGCCTATTTTGGACATTGACACCACTGATGCAAATAACCCTCTTGCTGTTACTGAATATATTGAAGATCTTTATTCTTACTACAGAAAAGTTGAGAGTTCTGGCTGTGTCTCACCACATTATATGGCACAACAATTTGACATTAACGAAAGGATGCGGGCCATACGGATTGACTGGCTTATTGAGGGTGGCAAGATTAATTGTGGAACCAAATGCAGTGCATCCCAATGA 666 0.4084 MRHLYYTALCLEKGLECVVHSLFKSSILALLVLPQSVWLKRIVSVSLLVTLSIHYLKALFWHSWYFLNLFGLRGLFQCRSWRFAAKIVAGTQKSNAEGTTKRSNLGISNGLTVEDQPVPMALEQTEPMLVGSDQMEEVEMEDIMEEPILDIDTTDANNPLAVTEYIEDLYSYYRKVESSGCVSPHYMAQQFDINERMRAIRIDWLIEGGKINCGTKCSASQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01645 221 Gene3D - 168 181 - -
Trre10g01645 221 SUPERFAMILY Cyclin-like 157 207 IPR036915 -
Trre10g01645 221 Pfam Cyclin, N-terminal domain 168 207 IPR006671 -
Trre10g01645 221 Gene3D - 182 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01645 Trre-Chr10 14457122 14461325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01645 115 207 Core Cell Cycle Gene Families AT2G17620 56.383 4.85e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01645 K21777 - gmx:100798068 172.17