Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01642 ATGAAGGTTTCCGAGGACAAGAGTTCTATCTCAAACTCAATCAACCCCACAAATTTTCAAGGTGGGTTAGATTCTAGAAAGGTTGGGCAAAACAGAAGAGTGTTGGGAGTGATTAATCAGAATCTGGTTGTTGAAGGGAGACCATATCCTTGTGTTGTTGACAAAAGTGCATTGTCAGAAAATGAGGTTTGTGAGAAGAAGCAAGCGGATCCGGGGCATCGACCCATTACTAGGAGGTTTGCTGAAAAAATTGTTGCAGGCACACAAAAATCTAATGCTGAGCCAGTGCCAATGGCTTTAGAGCAAATAGAACCAATGCTTGTTGGATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATGGAAGAGCCTATTTTGGACATTGACACCACTGATGCAAATAACCCTCTTGCTGTTACTGAATATATTGAAGATCTTTATTCTTTGTACAGAAAAGTTGAGAGTTCTGGCTGTGTCTCACCAAATTATATGGCACAATAA 504 0.4067 MKVSEDKSSISNSINPTNFQGGLDSRKVGQNRRVLGVINQNLVVEGRPYPCVVDKSALSENEVCEKKQADPGHRPITRRFAEKIVAGTQKSNAEPVPMALEQIEPMLVGSDQMEEVEMEDIMEEPILDIDTTDANNPLAVTEYIEDLYSLYRKVESSGCVSPNYMAQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01642 167 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01642 Trre-Chr10 14429632 14431666 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01642 14 165 Core Cell Cycle Gene Families AT1G76310 37.895 3.18e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01642 K21777 - gmx:100798068 214.927