Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01638 ATGTTTGAATGCATAAGAAGTTGTACAAAGCAAAGATTAGAAGATGGAGATGAAGAAGGTGTCCGTCAGAGTGGCACGCCGACCACTAAACCAGCCGTCAAAAGCCTGACTGCACAGATTAAGGACATGGTGCTGAAGTTAAAGGGTGCTGACAAAAGTGGTTCTAGTCCTTACAACAAAGGACTGAAATCATCTACCAATTCTGAAGGGGTTCAATACCCTTACATGGGAGGATTAAGCTCAGGTTCAACTCCTCCGTGGGACTTAAGCGCTAATTTTGCCGGTGGAAGATCAGACCAAAGGTTTATAGGGGGAACTAGTGGTAACCAAACCCCTAGAGTGCAAGAGCCAGTTGTAGCTGCAGCTCCTAAGGCAGTGGTGGAGGAGGTGGATGGAAACAAAGTGTGGGTGGCACAGGTGGAGCCAGGGGTTGATGTTACCTTTGTGTCTCTTCCTGATGGTGGGAACGATCTCCGAAGAATTCGCTTCAACCGAGATATGTTCGATAAGTGGCAAGCTCAAGTATGGTGGGGAGAGAATTTTGACAGGCTAAGGGAGCTGTATAATGTCCAGACATTCAATCGTCAAGCTCTTAACAACACTAATCCTCCACCATCTGAAGATGAGCAGAGAGATTCTTCTGCTTATTGGAGGCTTCATACCGGAGGAGATACCCCTATGGCTGGATGGTTCAATGATTCAGCAGAAAGGAATCAATACTATAATCCTGCAAGATTCACTATGGGACAAGGAAGCAGTAGCCACCAACAAATTCATGCAGCAGGATCATCCATGGAAGTATCAAGGACTTCTTCTAAAGATGAGCTTTCCTTCAGCAATGCAAGTGATATTGAATCTGAATGGTTGGAGCAAGTTGAGCCTGGAGTGTTTGTTACTATCAGGCAATTACCTGATGGGAACAAGGAGATTCGTCGTATCAGATTCAGTCGACAGAGGTTTGGAGATGAAGAAGCAAGGAAATGGTGGGAAGACAACAGAGAAAGAGTGAATGCTCAGTTCCTGTGA 1026 0.4561 MFECIRSCTKQRLEDGDEEGVRQSGTPTTKPAVKSLTAQIKDMVLKLKGADKSGSSPYNKGLKSSTNSEGVQYPYMGGLSSGSTPPWDLSANFAGGRSDQRFIGGTSGNQTPRVQEPVVAAAPKAVVEEVDGNKVWVAQVEPGVDVTFVSLPDGGNDLRRIRFNRDMFDKWQAQVWWGENFDRLRELYNVQTFNRQALNNTNPPPSEDEQRDSSAYWRLHTGGDTPMAGWFNDSAERNQYYNPARFTMGQGSSSHQQIHAAGSSMEVSRTSSKDELSFSNASDIESEWLEQVEPGVFVTIRQLPDGNKEIRRIRFSRQRFGDEEARKWWEDNRERVNAQFL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01638 341 MobiDBLite consensus disorder prediction 13 32 - -
Trre10g01638 341 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 341 IPR044532 -
Trre10g01638 341 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Trre10g01638 341 MobiDBLite consensus disorder prediction 49 69 - -
Trre10g01638 341 Pfam Transcription factor regulating root and shoot growth via Pin3 285 339 IPR013591 -
Trre10g01638 341 Pfam Transcription factor regulating root and shoot growth via Pin3 135 188 IPR013591 -
Trre10g01638 341 Pfam Transcription factor BRX N-terminal domain 26 47 IPR027988 -
Trre10g01638 341 ProSiteProfiles BRX domain profile. 286 341 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01638 Trre-Chr10 14395418 14399517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01638 1 341 Major Intrinsic Protein MIP AT1G31880 47.339 1.18e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01638 - - mtr:11415593 423.32