Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01637 ATGGAGAGGTACAAATTAATCAAGGAAGTTGGTGATGGAACGTTCGGGAGTGTCTGGAGAGCAATTAGTAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTAAGAGAAGTCAAGTCTTTACGAAAAATGAACCACCCAAATATTGTGAAACTGAAAGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTATATCAACATATGAAAGACAGGGAAAAATTGTTCTCTGAAGGTGAAATTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCATCAGCGTGGTTACTTCCATCGTGACCTTAAGCCTGAAAACTTGCTGGTTACTAAGGACATTATCAAAATAGCTGATTTTGGTCTCGCCCGTGAGATCAGCTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTACATCTATAGCTCCAAAGTTGACATGTGGGCGATGGGTGCGATAATGGCCGAGCTGTTCTCTCTTCGACCTCTTTTTCCAGGAGCCAGTGAGGCAGATGAGATCTACAAAATATGTGGTGTGATGGGCAATCCAACTACTGAATCATGGGCTGATGGACTCAAACTTGCAAGGGATATTAATTATCAGTTTCCACAGCTTGCGGGTGTAAATCTTTCTGCTTTGATCCCATCTGCAAGTGATCATGCAATCAGCCTTATCCAATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACGGCTTTAGAGGCCCTTCAACATCCTTTCTTTCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCTCCAGAGCAGTAGCGAGAACTCCTCCACCTGGAACCAGGGGTTCACTGGTGGATCAGCAAGGGGTCAAGAGATATCCGGGTGCTCTACCCAATTCAAAGCCGACCAATTATTTTCCATCTCCAAAAGTACAACCTTCTTCAGGTGTGCAGCGGAAGCTAGATATGGTAAATCAGGATGGAGTTAAGAATGAAAAATCAATGAAGACTACTACACAATCAAAATATCGATTGCCAGGAAAGGAAAGTCCAACTTCTATGAACAAAGGAAGAACTACACGCGGGGTTTCAGAAACAGCTGAGAGGTTGGCCAATATGTCTATTGGTAATCAAAGACAAGCAATGGGGCAACCCCGCCCTCCAATGAAAGCTGGAGTTAATTGGAGTTCCAAATCTCCTAACTTCATGCTCAGGCCTGCACCACAGATTCCGACTGGAAGAACATACCCAAGAAAAGTTGCTGGATGA 1347 0.4373 MERYKLIKEVGDGTFGSVWRAISKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQHMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYIYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVMGNPTTESWADGLKLARDINYQFPQLAGVNLSALIPSASDHAISLIQSLCSWDPCKRPTALEALQHPFFQSCFYIPPSLRSRAVARTPPPGTRGSLVDQQGVKRYPGALPNSKPTNYFPSPKVQPSSGVQRKLDMVNQDGVKNEKSMKTTTQSKYRLPGKESPTSMNKGRTTRGVSETAERLANMSIGNQRQAMGQPRPPMKAGVNWSSKSPNFMLRPAPQIPTGRTYPRKVAG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01637 448 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Trre10g01637 448 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Trre10g01637 448 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 346 - -
Trre10g01637 448 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01637 448 MobiDBLite consensus disorder prediction 327 347 - -
Trre10g01637 448 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Trre10g01637 448 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Trre10g01637 448 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Trre10g01637 448 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Trre10g01637 448 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01637 448 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01637 448 CDD STKc_MAK_like 4 283 - -
Trre10g01637 448 MobiDBLite consensus disorder prediction 298 390 - -
Trre10g01637 448 MobiDBLite consensus disorder prediction 404 448 - -
Trre10g01637 448 MobiDBLite consensus disorder prediction 356 390 - -
Trre10g01637 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01637 Trre-Chr10 14378123 14382645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01637 1 290 Core Cell Cycle Gene Families AT3G48750 38.591 1.16e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Trre10g01637 Pkinase 2.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01637 K08829 - gmx:100810150 790.801