Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01579 ATGGGAATGTGGCTCTATATTGTAGCAATTATTTCTCTATACATTTTTATTCATGCCCTTCTCAATGTAATATACAACAAAAAGTTACCACCAAGCCCTCCAACCATACCTTTCATTGGTAACCTTTTTTGGCTTCTAAAGTCATCAAAAAATTTCGCTGAAATTGAACCTGTTCTTCGTTCATTACGTTTTAAATATGGTGATATTGTTACCATTTTTATAGGTTCAAGACCTTCAATTTTCATTACATCCCATGAAGCTGCTCATAGAGCACTCGTTAAAAATGGTACGATTTTTGCTAATCGTCCCTTAGCTCTTGAAACAACCAAACTATTCTTCCCTAAACAACATTCCATCAGTACGTCAACTTATGGTCCAATTTGGAGACTGTTACGCCAAAATTTCATGCAAGCGACTCAACCTTCTCGGTTGAATTTATATTCCCGTTGTCGTAAATGGGCATTGAGTGTTCTCAAAAAAAGTATTTTAGTTGATATTGAACAAGGAAACAAGGTCATACCGATTGATGATTATTTTAATTTTACACTTTATACTTTATTCACGTATATGTGTTTGGGGGAGAAGTTTGATAGAGAAAGTGTTGAGAATATTCAAAGTGTACAACATTGTTTAATTCACAATTTTATTAGGTTTAACGTGTTGAATTTCGTACCGATGTTGACTAGGATTGTGTTTAGAGGATTATGGAGAGAGATTTTGCAAATCCGTGAAAATCAAATGAATGTGTTTCTTCCTATTATAAAAGCGCGTCAAGAGAAAATAAAAAGCAAGATTAATGTCAATGTTGGAGATGACGATAAGGAAGATTTTCAGGCTTATGTTGATACCCTTTTTGATTTAAAACTTCCGGATAGTGGAAACAATCTAAATGATGAAGAGTTGATCGAAAATCAAGGTCATCATCAAGGCAGTGTCTACGTTCATCTGCACTGCTGA 957 0.3438 MGMWLYIVAIISLYIFIHALLNVIYNKKLPPSPPTIPFIGNLFWLLKSSKNFAEIEPVLRSLRFKYGDIVTIFIGSRPSIFITSHEAAHRALVKNGTIFANRPLALETTKLFFPKQHSISTSTYGPIWRLLRQNFMQATQPSRLNLYSRCRKWALSVLKKSILVDIEQGNKVIPIDDYFNFTLYTLFTYMCLGEKFDRESVENIQSVQHCLIHNFIRFNVLNFVPMLTRIVFRGLWREILQIRENQMNVFLPIIKARQEKIKSKINVNVGDDDKEDFQAYVDTLFDLKLPDSGNNLNDEELIENQGHHQGSVYVHLHC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01579 318 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 SUPERFAMILY Cytochrome P450 27 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 Pfam Cytochrome P450 30 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 Gene3D Cytochrome P450 24 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01579 318 PANTHER CYTOCHROME P450 FAMILY 1 8 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01579 Trre-Chr10 13753088 13758984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01579 1 302 Cytochrome P450 AT1G64940 36.570 2.22e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01579 K24184 - gmx:102660230 437.958