Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01563 ATGGCAGGACAATCAAGAAAATGGATGATACTAATAGCAACAATATGGATTCAAGCATTTACAGGAACAAATTTTGATTTTTCATCATATTCATCAACAATGAAATCTGTTCTTAAAATCTCACAAGTTCAACTTAACTACTTAGCAACTGCTAGTGATATGGGTAAAGTATTTGGTTGGTCTTCTGGTCTTGCTCTTATGTATCTTCCAATATCTCTTGTTATGTTTATTGCTGCTTCTATGGGTCTTGTTGGTTATGGCCTTCAATTTCTTCTCATCAATAACTTCATCTCTTTGCCTTATTTTCTGGTTTTTCTTCTGTGTCTGCTAAGTGGCTGTAGCATATGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATAAAAAATTTCCCTGTTAACAGACCCTTAGCATTATCACTCACAGTGAGTTTCAACGGCGTAAGTGCAGCACTCTACACTCTCGCCGCGAATTCAATAAACCCTTCATCAGATAATCTCTATCTTCTTTTAAATGCCCTTGTTCCTCTTCTCACTTCAATTGCAGCATTACTTCCAATCCTTCGCCAACCGCCTTTATCTGACACTCATTCTCCACACGCCGCTCGCCACAACTCGGTTATATTTCTTACATTGAACATTTTAGCGGTTTTCACTGGCCTTTATCTCCTTATATTTGCCTCATCAACTTCTGATGAGGCCACATCAAGGTTTTACTTTGGCGGAGCTCTTGTACTTTTAATCTCGCCGTTATGTATTCCTGGTGTTATATATGCTAGAGATTGGTTTCACCGCACTGTTCATTCGAGCCTTCGAGTTGAAAACACTGGTTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTTCTTACGCGTCAAAATAGCGCTCGTAATGTCAGCAATGGAGATAGTCAAAGCCTACTTGGCGAAAATGGATATGGAATTCAGAGGGCAAAAAGTAGTGATGTGAATTGTGACAAGTTTTTTGTTCAGGATCAATTGGAAATGCTGGGAGAAGAACATTCAGCCGCGGTTCTCGTAAAAAGGTTGGATTTTTGGCTTTACTATGTTGCATACTTTTGTGGAGGTACTCTTGGTCTTGTTTACAGCAATAATCTTGGACAGATAGCTCAATCTTTAGGCCACAGTTCAAGAACATCGACCCTTGTCACGCTATATTCATCGTTCTCTTTCTTTGGCCGTTTGCTTTCAGCTACGCCAGACTACATTCGAAATAAGATATACTTTGCGAGAACAGGATGGCTAACCATTGCACTAATACCGACACCAATTGCATTTTTCTTGCTGGCTTCATCAGATAGTGCTGCGGCACTTAATATAGGCACTGCGCTAATCGGTTTGAGCTCAGGTTTCATATTTGCAGCTGCAGTGGCGGTTACGTCTGAGCTATTTGGACCTAACAATCTTAGTGTCAATCACAACATTCTTATTACAAATATTCCAATCGGATCCCTTCTCTATGGATTTATGTCTGCATTAGTTTATGATGCTAATGCTATCTCGGCACCCGGAAACGGAAACATAATAATGTCCGATTCGTTAGTGTGCATGGGAAGACATTGCTATTTCTGGACATTTGTCTGGTGGGGATGTATATCTGTCATAGGATTAGTTTCTAGTTTGCTGTTATTCTTAAGAACCAAACATGCTTATGACTGTTTTGAGAGACACCGTATTTCAGCACAATCGACCGTGTCTTGA 1728 0.3976 MAGQSRKWMILIATIWIQAFTGTNFDFSSYSSTMKSVLKISQVQLNYLATASDMGKVFGWSSGLALMYLPISLVMFIAASMGLVGYGLQFLLINNFISLPYFLVFLLCLLSGCSICWFNTVCFVLCIKNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDNLYLLLNALVPLLTSIAALLPILRQPPLSDTHSPHAARHNSVIFLTLNILAVFTGLYLLIFASSTSDEATSRFYFGGALVLLISPLCIPGVIYARDWFHRTVHSSLRVENTGFILVHVDDLELHKELLTRQNSARNVSNGDSQSLLGENGYGIQRAKSSDVNCDKFFVQDQLEMLGEEHSAAVLVKRLDFWLYYVAYFCGGTLGLVYSNNLGQIAQSLGHSSRTSTLVTLYSSFSFFGRLLSATPDYIRNKIYFARTGWLTIALIPTPIAFFLLASSDSAAALNIGTALIGLSSGFIFAAAVAVTSELFGPNNLSVNHNILITNIPIGSLLYGFMSALVYDANAISAPGNGNIIMSDSLVCMGRHCYFWTFVWWGCISVIGLVSSLLLFLRTKHAYDCFERHRISAQSTVS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01563 575 Gene3D MFS general substrate transporter like domains 353 574 IPR036259 -
Trre10g01563 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 561 - -
Trre10g01563 575 Pfam Nodulin-like 7 253 IPR010658 -
Trre10g01563 575 SUPERFAMILY MFS general substrate transporter 5 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01563 Trre-Chr10 13467966 13472205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01563 1 573 Nodulin-like Gene Family AT1G31470 57.840 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01563 - - gmx:100775393 889.797