Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01562 ATGTCACATATTCTCAATGAAGTTGCAGCCACAAAATATGAAAAATTTGAAGTCAAGTTCATTAAGAAAAGTGTTATAAAAGCTCTCAATCATTTTCCAAAGCCATTTTCAGTGATTAATCTCTCGAATCTTGATCTACTTTCAGGTCGTTTTCCTGTTACATATTTATATTTCTACAAAAAACCAAAACTAGGTAACTTCAAATCTTTTGTTAACACTCTTAAAACCTCTTTAGCTCAAACACTTAATCATTACTATCCCTTTTCTGGCCAAATTGTTCAAAATCACAAAACCAATGAACCTGAAATCATTTGTGACAACAATGGTTCATTACTCATTGAAGCACAAGTAAATATTTCACTAAAGAATTTAGATTTTTATAATCTCAATGAAACTCTTGAAGAAAAACTAGTCTCGGTTCAACCGAATTTCCCTTTACAAATTCAGGTAACAGAATTCATTTGTGGTGGAATTTCAATAGCATTTACATTTGATCATGCATTAGGTGATGCAACTTCATTTGGTAAATTCATTTCATCATGGTGTGAAATATCACAAAATAAAGCGATATCTTGCATACCGAATCATACAAGAAACCTTCGCGCGCGTTCACCTCCAAAATACCAACCTTATTTAGACCAAATTTTCATGAAATGTACCATAGAAGAAATCCAAAACATGAAAATGAATAACAATATTTCGCTTAAACGTCTTTATCATATCGATGCATCGAGTATTAACATGCTGCAGAGACTTGCTTCGGTTAATGGAACCAAGAGAACAAAGATTGAGGCTTTCTCTGCTTATGTATGGAAGATAATGATAAACACATTTGATCAAAGTAAGTATAAAAAATGCAAGATGGGCTGGTTAGTAGATGGAAGAGAAAGAATGAGTGGAAGCGAAAAATCAATGTCGAATTACATTGGTAATGTATTGTCTTTGGCATTTGGTTCGGCGAAAATTGAAGAATTGAAAGAAAGTTCATTATCAGACATAAGTGAAATAGTTCATGATGCAATATCAAAGGTTAGTAATGAGGAACATTTTTTGGATTTGATTGATTGGATTGAGTTTCATAGGCCAGGTTTGATGCTTGCAAAGGCGGTATTAGGACAGGATGATGGACCTGTCTTGGTGGTTTCTTCAGGTCAAAGGTTTCCTGTTAGTGAAATTGATTTAGGATTTGGGAGTCCTTTGTTAGGGACAGTGTATACTTCTATTGAAAGGGTTGGTGTTGGTTATATGAATCAAAGGAAGAGTGGTAAAGGTGATGGTTCATGGACTGTTTCTGCTATCTTGTGGCCTGAATTGGTGGATACTTTGAAGGATGATCCAATTCTCCAGCCTATGACTGCTTCTCATCTTCAACTTTAG 1377 0.3442 MSHILNEVAATKYEKFEVKFIKKSVIKALNHFPKPFSVINLSNLDLLSGRFPVTYLYFYKKPKLGNFKSFVNTLKTSLAQTLNHYYPFSGQIVQNHKTNEPEIICDNNGSLLIEAQVNISLKNLDFYNLNETLEEKLVSVQPNFPLQIQVTEFICGGISIAFTFDHALGDATSFGKFISSWCEISQNKAISCIPNHTRNLRARSPPKYQPYLDQIFMKCTIEEIQNMKMNNNISLKRLYHIDASSINMLQRLASVNGTKRTKIEAFSAYVWKIMINTFDQSKYKKCKMGWLVDGRERMSGSEKSMSNYIGNVLSLAFGSAKIEELKESSLSDISEIVHDAISKVSNEEHFLDLIDWIEFHRPGLMLAKAVLGQDDGPVLVVSSGQRFPVSEIDLGFGSPLLGTVYTSIERVGVGYMNQRKSGKGDGSWTVSAILWPELVDTLKDDPILQPMTASHLQL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01562 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 405 - -
Trre10g01562 458 Gene3D - 15 212 IPR023213 -
Trre10g01562 458 Pfam Transferase family 17 445 - -
Trre10g01562 458 Gene3D - 219 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01562 Trre-Chr10 13415828 13417204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01562 42 401 Monolignol Biosynthesis Gene Families AT5G48930 24.866 9.95e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01562 - - psat:127119885 800.431