Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01534 ATGTTTCCAACATTTTCATTTTGTTTATCTCTTCTCTTTGCTTTCAACTTCATCCAAAACACAATTACCTCTTCCTTAGGAAACAAGACAGATAATTCGGCATTGCTCAAATTCAAAGAATCAATCTCTAATGACCCATTAGTTGTGACCGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGCTTCATCTACAGCCATGCCCTGCTAAAGGAAGTTTTGGTTCTGTTTACAAAGGAAATCTTGCATCAGAAGATAAAGTTGTTGCCGTAAAGGTCTTGAACCTTCAAAAGAAAGGAGCTCACAAGAGTTTCATTGCTGAATATTACAAAGGTCAAGAATTTAAGGCATTAGTGTTTGAATACATGAACAATGGAAGCTTAGAACAATGGCTATATCCAGGGATGGAAACTAGTACAATTGGAATTAAAGGGACTATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAATATCCACATATGGTGACATGTATAGCTTCGGGGTACTTATGTTGGAAATGCTTACCGGAAGAAGACCAACAGATGAAATGTTTGAAGATGGTCAAAATCTACACATGTTTGTTGAAAAGTCATTTCCTAATAATCTTATACAGATTTTGGACCCACATCTTCAACGAAGAAATGAAAAAGAAACAATAGAAGATGGAAAAATTGGGAATTTCACTCCAATTGTAGAAAAGTGTTTAGTTTCACTTTTTCAGATTGGTCTTGCTTGCTCAAAGGAATCACCGAAAGAAAGAATGAATATAGTGGATGTCACCAGAGAATTAAGCATGATCAGAAAGGCCTTTATTTCTGGTTAG 828 0.3623 MFPTFSFCLSLLFAFNFIQNTITSSLGNKTDNSALLKFKESISNDPLVVTGNNKLCGGISELHLQPCPAKGSFGSVYKGNLASEDKVVAVKVLNLQKKGAHKSFIAEYYKGQEFKALVFEYMNNGSLEQWLYPGMETSTIGIKGTIGYAPPEYGMGSEISTYGDMYSFGVLMLEMLTGRRPTDEMFEDGQNLHMFVEKSFPNNLIQILDPHLQRRNEKETIEDGKIGNFTPIVEKCLVSLFQIGLACSKESPKERMNIVDVTRELSMIRKAFISG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01534 275 SUPERFAMILY Protein kinase-like (PK-like) 69 269 IPR011009 -
Trre10g01534 275 SMART serkin_6 62 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01534 275 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 62 132 - -
Trre10g01534 275 Pfam Protein tyrosine and serine/threonine kinase 143 264 IPR001245 GO:0004672|GO:0006468
Trre10g01534 275 Gene3D Transferase(Phosphotransferase) domain 1 118 270 - -
Trre10g01534 275 Gene3D Phosphorylase Kinase; domain 1 51 115 - -
Trre10g01534 275 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01534 Trre-Chr10 13182165 13185306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01534 135 272 Receptor kinase-like Gene Family AT3G47110 40.141 2.64e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre10g01534 PK_Tyr_Ser-Thr 1.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01534 - - pvu:PHAVU_002G126600g 228.794