Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01520 ATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTTAGCCATTGGTGGCAGCTCTCAGAAGGATACTAGTACAATTGGAATTAAAGGGACTGTTGGTTATGCTCCTCCAGAGTATGGGATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACTGGTAGAAGACCCACCGATGAAACTTTGGAAGATGGTCAAAATCTGCATAACTTTGTTAGGATTTCATTTCCTGATAACCTTATGAAGATTTTAGACCCACTTATTGTATCAAGAGATGCTGGAGTTTCAATACAAGATGGAAACAGTGAGAATCTTATTCCAAGTGTAGAAGAGTGCTTAGTTTCACTTTTTAAGATTGGACTTGTTTGTTCAATGGAATCGCCGAAAGAAAGAATGAATATTGTGGAAGTCAATAGAGAGCTTATCATAATTAAAAAGACCTTTCTTGCCGGTGAGATAAATTGA 501 0.3812 MVAHVSDFGIARLVLAIGGSSQKDTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDETLEDGQNLHNFVRISFPDNLMKILDPLIVSRDAGVSIQDGNSENLIPSVEECLVSLFKIGLVCSMESPKERMNIVEVNRELIIIKKTFLAGEIN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01520 166 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 157 - -
Trre10g01520 166 SUPERFAMILY Protein kinase-like (PK-like) 2 158 IPR011009 -
Trre10g01520 166 Pfam Protein kinase domain 5 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01520 166 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
Trre10g01520 166 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01520 Trre-Chr10 13018245 13018853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01520 1 161 Receptor kinase-like Gene Family AT3G47580 40.741 3.96e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre10g01520 Pkinase 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01520 - - mtr:11405832 255.373