Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01512 ATGAATGTTGCTCGTAACAAATTATATGGAGAAATCCCTTCATCCATAGGGAATCTTTCATACGTAACACATTTTTCAGTTGCTCGTAACAACTTAGAGGGAGATATTCCACAAACAATTTGTCGCCTCAAAAACTTAACAGTTTTATATGTGGGTGAGAACAAATTGTCTGGTAACCCTCCTTCTTGTCTTTACAACATCTCATCACTTACTGAACTTTACATGGCAGGGAATAACTTTCATGGCCCTCTTCCAGTAAACATGTTTCACACCCTCCCAAATATCCAAGAGTTTGGTATTTCAGGAAATCAATTTTCAGCCAAACTTGTCTTAGCCATTGGTGGCAGCTCTCAGAAGGATACTAGTACAATTGGAATTAAAGGGACTGTTGGTTATGCTCCTCCAGAGTACGGAATGGGTTCTGAAGTTTCCACATGTGGTGACATGTATAGTTTTGGAATTCTGGTGTTGGAAATGCTTACCGGTAAAAGACCTACTGATGAAGTTTTTGAAGACGGTCAAAATCTGCATAACTTTGTTGGAATATCATTTCCTGATAACCTTATGAAGATTTTAGACCCACATCTTGTATCAAGTGATGTAGAAGTAGCAATACAAGATGGAAATCGATTGGAATTATTTGTTCGATGGAATCACCGAAAGAAAGAATGA 672 0.3795 MNVARNKLYGEIPSSIGNLSYVTHFSVARNNLEGDIPQTICRLKNLTVLYVGENKLSGNPPSCLYNISSLTELYMAGNNFHGPLPVNMFHTLPNIQEFGISGNQFSAKLVLAIGGSSQKDTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGKRPTDEVFEDGQNLHNFVGISFPDNLMKILDPHLVSSDVEVAIQDGNRLELFVRWNHRKKE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01512 223 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01512 223 Gene3D Transferase(Phosphotransferase) domain 1 90 215 - -
Trre10g01512 223 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 87 - -
Trre10g01512 223 SUPERFAMILY L domain-like 3 115 - -
Trre10g01512 223 Gene3D Ribonuclease Inhibitor 1 68 IPR032675 -
Trre10g01512 223 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 121 200 - -
Trre10g01512 223 Pfam Leucine rich repeat 23 80 IPR001611 GO:0005515
Trre10g01512 223 SUPERFAMILY Protein kinase-like (PK-like) 123 196 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01512 Trre-Chr10 12911775 12914348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01512 1 85 Receptor kinase-like Gene Family AT3G47580 34.118 1.92e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre10g01512 LRR_8 2.8e-08 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01512 - - mtr:11405832 178.718