Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01511 ATGCAAAATAGCACAGTTGGAATAAAGGGGACTATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCGAAGTTGTCAATTGAAGGCGATATGTATAGCTTTGGAATTCTAGTTTTAGAAATGTTAACCGGAAGGAGACCTACAGATGAAATGTTTGAAGACAGTCATAGTCTTCACAATTTCGTTAAAATTGCGATTTCAAATGATCTTTTGCAGATTGTAGATCCAACCATTGTCCACAATGAATTGGAACGAGCTACTGACAGTGAGAATCTCGGCACTATGCATTCTAATGTAGAGAAATGCCTATTTTCGCCTTTTAGTATTGCACTTGCTTGTTCAATGGAATCACCGAAAGAACGAATGAGTATGGTTGAAGTCGTAAGAGAGCTTAATATAATCAAAAGTTTCTTTCCTGAGAGTTTAATGGAAAAAGCTGCATTACAAACACAAAAAGTATGA 462 0.3701 MQNSTVGIKGTIGYAPPEYGMGSKLSIEGDMYSFGILVLEMLTGRRPTDEMFEDSHSLHNFVKIAISNDLLQIVDPTIVHNELERATDSENLGTMHSNVEKCLFSPFSIALACSMESPKERMSMVEVVRELNIIKSFFPESLMEKAALQTQKV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01511 153 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
Trre10g01511 153 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01511 153 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 135 - -
Trre10g01511 153 SUPERFAMILY Protein kinase-like (PK-like) 4 134 IPR011009 -
Trre10g01511 153 Pfam Protein tyrosine and serine/threonine kinase 9 65 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01511 Trre-Chr10 12892190 12892736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01511 1 138 Receptor kinase-like Gene Family AT3G47110 44.286 1.22e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre10g01511 PK_Tyr_Ser-Thr 7.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01511 - - gmx:100792724 219.55