Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01507 ATGGTAAGAAATTTCCCCAAGTTTGATGTTGAGAGGAGAGACCAAGACACAAGGATTAGTATCTGCTGTGCTACAAAGCCAGGATTATTACTATCAACTGTGAACACATTGAAAGCATTAGGCCTTGAGATTCATCGGTCTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTAAATGGTCGGAGAAATTGTAAGAATCCTGAAGAGATCAAGCGATCACTATTCAAGGATGCAGGTTATCACTAG 264 0.3939 MVRNFPKFDVERRDQDTRISICCATKPGLLLSTVNTLKALGLEIHRSVISSFNDFSLQASCSEVNGRRNCKNPEEIKRSLFKDAGYH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01507 87 CDD ACT_UUR-ACR-like 17 58 - -
Trre10g01507 87 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01507 Trre-Chr10 12811564 12813364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01507 1 86 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 56.977 1.15e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01507 - - gmx:100784145 145.591