Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01502 ATGCAAAACATTCTCTCCGGCTTGGAACCTTTACTTAGAAGAGTGGTGAATGAAGAGGTGGAACGAGCAATAGGACAATGTTATCCATCGCGATCAATAACAAAGTCACTTTCATTGAGACTCAAAGCAGTGGAAGAACCATTAAATTTTGAATTCATAGTTGCTGTTAGAATTGCGCCAGGGACTAATCAAAGTGTCCGAGTTCGTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCATCGTGGTGAATTGTACAAGAAACACCACCCACCAAATCTAAAGTACGAAGTGTGGCGGCTAGAGAAAATTGGAAAAGATGGAGCTTTCCACAAAAAATTAACCAAAGAAGGAATTACTACGATACAAGAGTTTCTGAAATTATCGGTTGTTGATCCTCAAAGACTTTTTTTTTTTTGA 420 0.3881 MQNILSGLEPLLRRVVNEEVERAIGQCYPSRSITKSLSLRLKAVEEPLNFEFIVAVRIAPGTNQSVRVREGMTEPFVVKDHRGELYKKHHPPNLKYEVWRLEKIGKDGAFHKKLTKEGITTIQEFLKLSVVDPQRLFFF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01502 139 Pfam Calmodulin binding protein-like N-terminal domain 51 81 IPR046831 -
Trre10g01502 139 PANTHER OS02G0177800 PROTEIN 51 136 IPR012416 GO:0005516
Trre10g01502 139 Pfam Calmodulin binding protein central domain 94 136 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01502 Trre-Chr10 12794481 12795967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01502 1 44 Calmodulin-binding Proteins AT2G18750 45.455 6.93e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01502 - - vra:106766894 146.362