Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01490 ATGGGTTGGCCTTACATAGGAGAAACTTTTCAACTATATTCACAAGACCCAAATGTCTTTTTTGCATCAAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTAGGGTGTCCTTGTGTGATGATTTCAAGTCCTGAAGCTGCTAAATTTGTGTTGAATAAAGCTCAACTTTTCAAGCCAACATTTCCTGCAAGTAAAGAAAGGATGTTGGGAAAACAAGCTATATTTTTTCATCAAGGAGAGTATCATGCTAACTTAAGACGACTTGTTCTTCGCACTTTCATGCCACAAGCTATTAAAAATATTGTTCCTGACATTGAATCCATTGCTGAAGATAGTCTTAAATCAATGGAAGGAGGATTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAACGTTGCTCTACTTTCAATTTTTGGAAAAGATGAAATTAACTACAGAGAGAGATTGAAACAGTGTTACTACACACTTGAGAAAGGTTACAATTCAATGCCAATTAATCTTCCTGGAACACTTTTTCATAAAGCAATGAAAGCAAGGAAAGAACTTGCACAGATCTTAGCTGAAATAATCTCAAGTAGGAGAGAAAAGAAACAAGAATACAAAGATTTGTTAGGTTCATTCATGGATGAAAAATCAGGACTAAGTGATGAACAAATAGCAGATAATGTAATTGGAGTTATATTTGCAGCTCGTGATACCACAGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATATCAATGTCCTAGAAGCAGTGATTGAGGAACAAGAATCTATAATGAAGAGCAAGGAAGAAAATGGTGAAGAAAAAGGTCTTAAATGGGAAGATACAAAGAAAATGGTTATAACTTCAAGGGTTATTCAAGAAACTCTTAGAGTTGCATCAATTTTGTCATTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTGTTGCCACTGTTTAGGAATATACATCATAGTCCAAACAACTTTAAAGATCCAGAAAAATTTGATCCTTCAAGATTTGAGGTTGCAACAAAACCTAATACTTTTATGCCATTTGGAAGTGGGGTCCATGCTTGTCCTGGCAATGAATTAGCCAAGTTGGAAATTTTAGTCCTTTTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGAGGGTACAAAGAATGGGATTCAATATGGGCCATTTGCTCTTCCCCAAAATGGATTGCCCATAACATTATATCCTAAAAAGTAG 1278 0.356 MGWPYIGETFQLYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPQAIKNIVPDIESIAEDSLKSMEGGLITTFLEMKTFTFNVALLSIFGKDEINYRERLKQCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAEIISSRREKKQEYKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWIVKYLGENINVLEAVIEEQESIMKSKEENGEEKGLKWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEVATKPNTFMPFGSGVHACPGNELAKLEILVLLHHLTTKYRWSVEGTKNGIQYGPFALPQNGLPITLYPKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01490 425 Coils Coil 254 274 - -
Trre10g01490 425 Gene3D Cytochrome P450 1 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 CDD CYP90-like 25 423 - -
Trre10g01490 425 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 292 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 373 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 FunFam Abscisic acid 8 1 423 - -
Trre10g01490 425 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 PANTHER CYTOCHROME P450 26 1 398 - -
Trre10g01490 425 Pfam Cytochrome P450 3 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01490 425 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Trre10g01490 425 SUPERFAMILY Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01490 Trre-Chr10 12615943 12618183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01490 1 420 Cytochrome P450 AT4G19230 74.171 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01490 K09843 - gmx:100170674 781.941