Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01489 ATGGAACTAAGTATCATGTTATGTTTTTTCACTTCAATTCTCTTCATTGTTCTGTTCAGAAAATTCATCAAACCTTATGTCTCTAAAAGACAATACTTGCCACTTCCACCTGGTTCCATGGGTTGGCCTTACATAGGAGAAACTTTTCAACTATATTCACAAGACCCAAATGTCTTTTTTGCATCAAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTAGGGTGTCCTTGTGTGATGATTTCAAGTCCTGAAGCTGCTAAATTTGTGTTGAATAAAGCTCAACTTTTCAAGCCAACATTTCCTGCAAGTAAAGAAAGGATGTTGGGAAAACAAGCTATATTTTTTCATCAAGGAGAGTATCATGCTAACTTAAGACGACTTGTTCTTCGCACTTTCATGCCACAAGCTATTAAAAATATTGTTCCTGACATTGAATCCATTGCTGAAGATAGTCTTAAATCAATGGAAGGAGGATTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAACGTTGCTCTACTTTCAATTTTTGGAAAAGATGAAATTAACTACAGAGAGAGATTGAAACAGTGTTACTACACACTTGAGAAAGGTTACAATTCAATGCCAATTAATCTTCCTGGAACACTTTTTCATAAAGCAATGAAAGCAAGGAAAGAACTTGCACAGATCTTAGCTGAAATAATCTCAAGTAGGAGAGAAAAGAAACAAGAATACAAAGATTTGTTAGGTTCATTCATGGATGAAAAATCAGGACTAAGTGATGAACAAATAGCAGATAATGTAATTGGAGTTATATTTGCAGCTCGTGATACCACAGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATATCAATGTCCTAGAAGCAGTGATTGAGGAACAAGAATCTATAATGAAGAGCAAGGAAGAAAATGGTGAAGAAAAAGGTCTTAAATGGGAAGATACAAAGAAAATGGTTATAACTTCAAGGGTTATTCAAGAAACTCTTAGAGTTGCATCAATTTTGTCATTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTGTTGCCACTGTTTAGGAATATACATCATAGTCCAAACAACTTTAAAGATCCAGAAAAATTTGATCCTTCAAGATTTGAGGTTGCAACAAAACCTAATACTTTTATGCCATTTGGAAGTGGGGTCCATGCTTGTCCTGGCAATGAATTAGCCAAGTTGGAAATTTTAGTCCTTTTACATCATCTGACCACAAAGTACAGGTGGTCTGTGGAGGGTACAAAGAATGGGATTCAATATGGGCCATTTGCTCTTCCCCAAAATGGATTGCCCATAACATTATATCCTAAAAAGTAG 1395 0.3548 MELSIMLCFFTSILFIVLFRKFIKPYVSKRQYLPLPPGSMGWPYIGETFQLYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPQAIKNIVPDIESIAEDSLKSMEGGLITTFLEMKTFTFNVALLSIFGKDEINYRERLKQCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAEIISSRREKKQEYKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWIVKYLGENINVLEAVIEEQESIMKSKEENGEEKGLKWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEVATKPNTFMPFGSGVHACPGNELAKLEILVLLHHLTTKYRWSVEGTKNGIQYGPFALPQNGLPITLYPKK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01489 464 Gene3D Cytochrome P450 26 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 FunFam Abscisic acid 8 26 462 - -
Trre10g01489 464 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 Coils Coil 293 313 - -
Trre10g01489 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Trre10g01489 464 Pfam Cytochrome P450 36 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 CDD CYP90-like 64 462 - -
Trre10g01489 464 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01489 464 PANTHER CYTOCHROME P450 26 31 437 - -
Trre10g01489 464 SUPERFAMILY Cytochrome P450 29 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01489 Trre-Chr10 12615826 12618183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01489 9 458 Cytochrome P450 AT4G19230 71.272 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01489 K09843 - gmx:100170674 832.402