Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01469 ATGGGAAGTGACACATGGAAGGCCCATTTGGGCATGGCAGTTGTGCAACTATTATATGGTGGTTACCATGTTATTACAAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTTTTCTGCTTCTATAGGGATCTTCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAAAGACAGACAAGGCTTCCCATTACTAAGCAACTATTGTTGTCATTCTTCTTTCTTGGATTAACCGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCATTACAGCCAGCTATTCCAGTCTTTACCTTTCTCTTTGCTGTAATCATTGGTGTAGAAAGAGTAAATTTGAAGAGTTTTGAGGGTCTGGCAAAGGTCGGAGGAACTCTTATATGTGTTTTGGGCGCAGTATTGATGGTTTTGTATCGCGGACCATCATTGATAGGATATTCAGAATTGGTCACTATACCACAAAATGAAATAAGTGACAGTGGTCAGCTAAAGCCTTCTGGATGGTTGATCAGTGGTTTAAAGGATCTTGGATTTGATAATTTTGAACTTGGAGTTGTATTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTCTTAACCATTCTGGCACCGGTATTGAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCATCTGCCTTTAACTATGGAGTCATTAGTTGGTGTAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTACAACCTGGTTTTTCTGCCCTATTGTCTCAGATATTCCTTGGAACTCCAATTTACTTGGGAAGTATCATAGGAGGATCTTTGATCATTGCTGGTCTTTATACTGTTACTTGGGCTTCTTATAAAGAAAAACATGCAACTGTTGGAATTATTACTTCTAATGACTCTCGGGTCTCTGAACCGTTTGTTCGTGGAAAAAGTGTACACGAAAAAGATCATATATAA 1113 0.3863 MGSDTWKAHLGMAVVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRLPITKQLLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSFEGLAKVGGTLICVLGAVLMVLYRGPSLIGYSELVTIPQNEISDSGQLKPSGWLISGLKDLGFDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAVVYAGTIASAFNYGVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGTPIYLGSIIGGSLIIAGLYTVTWASYKEKHATVGIITSNDSRVSEPFVRGKSVHEKDHI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01469 370 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020
Trre10g01469 370 Pfam EamA-like transporter family 196 333 IPR000620 GO:0016020
Trre10g01469 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 152 - -
Trre10g01469 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Trre10g01469 370 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01469 Trre-Chr10 12353444 12358472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01469 91 359 Nodulin-like Gene Family AT5G45370 60.294 1.54e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01469 - - gmx:100793730 539.265