Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01468 ATGGCAATGGGAAGTGACACATGGAAGGCCCATTTGGGCATGGCAGTTGTGCAACTATTATATGGTGGTTACCATGTTATTACAAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTTTTCTGCTTCTATAGGGATCTTCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAAAGACAGACAAGGCTTCCCATTACTAAGCAACTATTGTTGTCATTCTTCTTTCTTGGATTAACCGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCATTACAGCCAGCTATTCCAGTCTTTACCTTTCTCTTTGCTGTAATCATTGGTGTAGAAAGAGTAAATTTGAAGAGTTTTGAGGGTCTGGCAAAGGTCGGAGGAACTCTTATATGTGTTTTGGGCGCAGTATTGATGGTTTTGTATCGCGGACCATCATTGATAGGATATTCAGAATTGGTCACTATACCACAAAATGAAATAAGTGACAGTGGTCAGCTAAAGCCTTCTGGATGGTTGATCAGTGGTTTAAAGGATCTTGGATTTGATAATTTTGAACTTGGAGTTGTATTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTCTTAACCATTCTGGCACCGGTATTGAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCATCTGCCTTTAACTATGGAGTCATTAGTTGGTGTAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTACAACCTGGTTTTTCTGCCCTATTGTCTCAGATATTCCTTGGAACTCCAATTTACTTGGGAAGTATCATAGGAGGATCTTTGATCATTGCTGGTCTTTATACTGTTACTTGGGCTTCTTATAAAGAAAAACATGCAACTGTTGGAATTATTACTTCTAATGACTCTCGGGTCTCTGAACCGTTTGTTCGTGGAAAAAGTGTACACGAAAAAGATCATATATAA 1119 0.387 MAMGSDTWKAHLGMAVVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRLPITKQLLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSFEGLAKVGGTLICVLGAVLMVLYRGPSLIGYSELVTIPQNEISDSGQLKPSGWLISGLKDLGFDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAVVYAGTIASAFNYGVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGTPIYLGSIIGGSLIIAGLYTVTWASYKEKHATVGIITSNDSRVSEPFVRGKSVHEKDHI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01468 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Trre10g01468 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 340 - -
Trre10g01468 372 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Trre10g01468 372 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020
Trre10g01468 372 PANTHER WAT1-RELATED PROTEIN 12 350 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01468 Trre-Chr10 12353444 12358478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01468 93 361 Nodulin-like Gene Family AT5G45370 60.294 1.04e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01468 - - gmx:100793730 539.265