Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01416 ATGGCTGCCATGGAAGGAAGAATCTCTGAGGAATTAACGCCTAGGTATTATGCCCTTTGTACCATTGGAGGAATGCTTAGTGCTGGTACCACTCATCTTGCTACAACTCCTCTTGACGTTTTGAAAGTTAACATGCAGGTGCATCCTATTAAATATTACAGTATTTCGTCTTGCTTTACTACCTTGTTGAGGGAACAAGGGCCTTCTGTCCTTTGGAAAGGATGGACAGGCAAGTTCTTTGGTTATGGTGCTCAAGGAGGGTGCAGATTCGGTCTCTACGAATATTTTAAGGGAGTTTACTCTAACGTATTGGTAGACCAGCACAGGAGTCTTGTGTTCTTTCTTAGCAGTGCATCTGCTGAAGTTTTTGCCAACTTAGCTCTATGTCCATTTGAAGCCGTTAAAGTCAGGGTTCAAGCACAACCCCGTTTTGCTAAGGGTATGTTTGACGGATTTCCGAAGGTATATGCAGCAGAGGGCGCACGAGGATTCTACCGTGGACTTGTTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACATTCGAGCACTCTGTTGATTTTTTATATCGTAATGTTGTCAAAAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAACTTGGCGTGACATGTTTAGCTGGATATACCGCTGGATCTGTTGGTAGCTTTGTTTCTAATCCTGCTGACAATATAGTAGCTTCTCTTTATAACAGAAAAGCTGATAGTCTTCTGCTGGCTATCAGAAAAATTGGACTAGCAAATTTATTTACCAGGAGTCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCCATAACTTTGCAATGGTTTTTCTATGACACTATCAAAGTTTTAGGTGGACTGCCAACTAGTGGTGAAGTTGCACCTGACTTGAGAGGAGATGAGACAGGCTAG 924 0.421 MAAMEGRISEELTPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVFFLSSASAEVFANLALCPFEAVKVRVQAQPRFAKGMFDGFPKVYAAEGARGFYRGLVPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFVSNPADNIVASLYNRKADSLLLAIRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGLPTSGEVAPDLRGDETG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01416 307 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Trre10g01416 307 Pfam Mitochondrial carrier protein 20 101 IPR018108 -
Trre10g01416 307 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 18 289 - -
Trre10g01416 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Trre10g01416 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Trre10g01416 307 Gene3D Mitochondrial carrier domain 19 289 IPR023395 -
Trre10g01416 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Trre10g01416 307 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 299 IPR044677 GO:0005315|GO:1990547
Trre10g01416 307 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01416 Trre-Chr10 11930380 11936354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01416 1 297 Chloroplast and Mitochondria Gene Families AT2G17270 66.779 3.83e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01416 K15102 - gmx:100788561 559.681