Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01415 ATGTGCGGTACCTCTCATAAGAATACTAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCAGAGTATGGGGTGGGTTCTGAAGTGTCAACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACTGGTAGAAGACCCACCGATGAAACTTTGAAAGATGGTCAAAATCTGCATAACTTTGTTGGTATTTCATTTCCTGATAATCTTGTAAAGATTTTAGACCCACATATTGTATCAAGAGATGCTGGAGTTTCAATACAAGATGGAAACAGTGAGAATCTTATTCCAAGTGTAGAGGAGTGCTTAGTTTCACTTTTTAAGATCGGACTTGTTTGTTCAATGGAATCACCAAAAGAAAGAATGAATATTGCGGATGTCACTAGAGAGCTTAGCATAACCAAAAAAGCCTTTCTCTCTGGTGTTCGCGCTCATAATTAG 459 0.3834 MCGTSHKNTSTIGIKGTVGYAPPEYGVGSEVSTCGDMYSFGILMLEMLTGRRPTDETLKDGQNLHNFVGISFPDNLVKILDPHIVSRDAGVSIQDGNSENLIPSVEECLVSLFKIGLVCSMESPKERMNIADVTRELSITKKAFLSGVRAHN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01415 152 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01415 152 SUPERFAMILY Protein kinase-like (PK-like) 9 137 IPR011009 -
Trre10g01415 152 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Trre10g01415 152 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01415 Trre-Chr10 11910746 11911437 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01415 10 149 Receptor kinase-like Gene Family AT3G47580 36.429 2.53e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre10g01415 PK_Tyr_Ser-Thr 3.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01415 - - mtr:11405832 237.269