Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01414 ATGTTATGCACACAAAACTACATTTTGATTGATGTTAGGTCAGAGAAGGATAAGGACAAGTCCGGTATCCCTCGCCTTCCATCTAACCCTAAAAACAAGATGGTTGCTATTCCTGATAGTATTCATATTGGCATTTTAGCTGCTGCAGCTCATGCTGCTGCAAATAACAGTCCATTTACTATATATTACAATCCAAGGGCCAGCCCTTCCAAATTTGTTATTCTGTTGGCCAAGTATAACAAAGCCATGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAAACAGAGGAGTCTGGCGTACGTCGATATATGGGTACAATTACTGGAATTAGTGACTTGGATCCAGTCCGACGGAAAAATTCACAATGGCGCAATCTTTAG 393 0.3995 MLCTQNYILIDVRSEKDKDKSGIPRLPSNPKNKMVAIPDSIHIGILAAAAHAAANNSPFTIYYNPRASPSKFVILLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRRKNSQWRNL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01414 130 Pfam Auxin response factor 49 130 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Trre10g01414 130 Gene3D - 86 130 - -
Trre10g01414 130 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 130 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trre10g01414 130 FunFam Auxin response factor 86 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01414 Trre-Chr10 11901639 11903096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01414 41 130 B3 DNA Binding Superfamily AT1G19220 83.333 1.63e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01414 K14486 - ini:109187990 174.481