Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01407 ATGGCTGTAAGTGATAGTAACGAGAGTTCAAGAGAACTTGATCAGACACCAACATGGGCTGTTGCTGCTGTTTGCACTGTTTTCATCTTGATATCCATTGCTCATGAGAAGAGTCTTCACAAATTAGGAACGTGGTTAGGAAAAAGGCAAAAGAAGGCTTTACTTGAAGCTCTAGAGAAGGTCAAGGCTGAGTTGATGATATTAGGATTCATTTCACTGCTATTGACTATAGGGCAGAATTACATTGTGAGAATATGTATTTCTGAAAAAGTTGCAGACAAAATGTTGCCATGTCCACTTAAAAATATAAGTGATAACAAGGAATCAAGTAGTGATGAAGTGAGACATCTTAGGAAACTTGTGTCTTATGAACGTAGATATTTATCTTCTGATACTACCTCCTACAAATGTAGCAGAAAGGGACATGAACCGCTTTTATCTGTCAATGGACTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTCTTTCATGTGTTTTACAGTGCTGTTACAATGCTTCTTGGAAGACTAAAGATACGTGGATGGAAGGCATGGGAGGAAGAGGCTTCAAATAATGGTTATGACAATGGTGCTGCAAGATTTAGGCTCACTCATGAAACATCATTTGTGAGAGCTCATACCAGTTTTTGGACAAGGGTTTATATCTCCTTCTATATTGGCTGTTTTTTTAGACAGTTTTATAGGTCCGTGCGCAAGGTTGATTACCAGACTCTGCGCAATGGATTTATCAATGTCCACCTAGCTCCTGGAAGTAAATTTAATTTCCAAAAATATATCAAAAGATCATTAGAAGATGACTTCAAGGTAGTTGTGGGAGTAAGTCCTGTGCTATGGGCATCAGCAGTAGTTTTCCTGCTCCTAAACATTGATGGATGGCGTACTCCATTATGGGCATTCTTAATTCCAATTATTATAATTTTGGCTGTTGGAACAAAACTTCAAGTGATATTAGCAAGAATGGCTCTTGACATCACAGAGAGACATGCAGTTGTACAAGGAATGCCTCTTGTTCAAGGATCAGACAGATACTTTTGGTTTGGTCAACCTCAGTTTGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATGCATTCCAAATAACATATATACTGTGGACATGGTATTCTTTTGGGCTGGAAAATTGTTTCCGTTTAGACCTCAAACTTGCTATTATAAAAGTAGCTTTCGGGATTGTGATGCTATGCCTCTGCAGCTACATTACCCTTCCATTATATGCTCTTGTAACACAGATGGGTTCAAGAATGAAAAAATCAGTATTTGATGAACAAACATCAAAGGCATTAAAGAAATGGCACATGACAGTGAAAAAGAAGCAGAGAACAGTGAAGCTAGGAAAGTCCACTATAGGAACTATAGATGGTAGCACCATTGGATCAACAATGCAGTCACCTGGTCCAGCACTTCATCGTTTCAAAACTACTGGTCACTCAACAAGATCCTCAACCTTTGAGGAACAAGATGAATATGAATTATCTGATAATGAGTTGGCAAAAACTAATTTAATTGTAAGAGTTGATCATGATGGTGAGCAACAAGTTGAAGACAGACATCATAGTGAGGGAGAAGCCAATAATGACGAGTTCACTTTTTTCAAGCATAAAATTAAAAGCTTAGTTTAA 1665 0.379 MAVSDSNESSRELDQTPTWAVAAVCTVFILISIAHEKSLHKLGTWLGKRQKKALLEALEKVKAELMILGFISLLLTIGQNYIVRICISEKVADKMLPCPLKNISDNKESSSDEVRHLRKLVSYERRYLSSDTTSYKCSRKGHEPLLSVNGLHQLHILIFFLAVFHVFYSAVTMLLGRLKIRGWKAWEEEASNNGYDNGAARFRLTHETSFVRAHTSFWTRVYISFYIGCFFRQFYRSVRKVDYQTLRNGFINVHLAPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASAVVFLLLNIDGWRTPLWAFLIPIIIILAVGTKLQVILARMALDITERHAVVQGMPLVQGSDRYFWFGQPQFVLHLIHFALFQNAFQITYILWTWYSFGLENCFRLDLKLAIIKVAFGIVMLCLCSYITLPLYALVTQMGSRMKKSVFDEQTSKALKKWHMTVKKKQRTVKLGKSTIGTIDGSTIGSTMQSPGPALHRFKTTGHSTRSSTFEEQDEYELSDNELAKTNLIVRVDHDGEQQVEDRHHSEGEANNDEFTFFKHKIKSLV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01407 554 Pfam Mlo family 11 466 IPR004326 GO:0006952|GO:0016020
Trre10g01407 554 PANTHER MLO-LIKE PROTEIN 1 9 496 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01407 Trre-Chr10 11819238 11824531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01407 11 547 MLO family AT2G17480 60.109 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01407 K08472 - gmx:100790155 825.083