Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01406 ATGTTGAAAAGGGTGTTTTTTTCTTGTCTTTGGGTCTTTTATGGAAGTTTGTTGTCCATGGCTGTAAGTGATAGTAACGAGAGTTCAAGAGAACTTGATCAGACACCAACATGGGCTGTTGCTGCTGTTTGCACTGTTTTCATCTTGATATCCATTGCTCATGAGAAGAGTCTTCACAAATTAGGAACGTGGTTAGGAAAAAGGCAAAAGAAGGCTTTACTTGAAGCTCTAGAGAAGGTCAAGGCTGAGTTGATGATATTAGGATTCATTTCACTGCTATTGACTATAGGGCAGAATTACATTGTGAGAATATGTATTTCTGAAAAAGTTGCAGACAAAATGTTGCCATGTCCACTTAAAAATATAAGTGATAACAAGGAATCAAGTAGTGATGAAGTGAGACATCTTAGGAAACTTGTGTCTTATGAACGTAGATATTTATCTTCTGATACTACCTCCTACAAATGTAGCAGAAAGGGACATGAACCGCTTTTATCTGTCAATGGACTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTCTTTCATGTGTTTTACAGTGCTGTTACAATGCTTCTTGGAAGACTAAAGATACGTGGATGGAAGGCATGGGAGGAAGAGGCTTCAAATAATGGTTATGACAATGGTGCTGCAAGATTTAGGCTCACTCATGAAACATCATTTGTGAGAGCTCATACCAGTTTTTGGACAAGGGTTTATATCTCCTTCTATATTGGCTGTTTTTTTAGACAGTTTTATAGGTCCGTGCGCAAGGTTGATTACCAGACTCTGCGCAATGGATTTATCAATGTCCACCTAGCTCCTGGAAGTAAATTTAATTTCCAAAAATATATCAAAAGATCATTAGAAGATGACTTCAAGGTAGTTGTGGGAGTAAGTCCTGTGCTATGGGCATCAGCAGTAGTTTTCCTGCTCCTAAACATTGATGGATGGCGTACTCCATTATGGGCATTCTTAATTCCAATTATTATAATTTTGGCTGTTGGAACAAAACTTCAAGTGATATTAGCAAGAATGGCTCTTGACATCACAGAGAGACATGCAGTTGTACAAGGAATGCCTCTTGTTCAAGGATCAGACAGATACTTTTGGTTTGGTCAACCTCAGTTTGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATGCATTCCAAATAACATATATACTGTGGACATGGTATTCTTTTGGGCTGGAAAATTGTTTCCGTTTAGACCTCAAACTTGCTATTATAAAAGTAGCTTTCGGGATTGTGATGCTATGCCTCTGCAGCTACATTACCCTTCCATTATATGCTCTTGTAACACAGATGGGTTCAAGAATGAAAAAATCAGTATTTGATGAACAAACATCAAAGGCATTAAAGAAATGGCACATGACAGTGAAAAAGAAGCAGAGAACAGTGAAGCTAGGAAAGTCCACTATAGGAACTATAGATGGTAGCACCATTGGATCAACAATGCAGTCACCTGGTCCAGCACTTCATCGTTTCAAAACTACTGGTCACTCAACAAGATCCTCAACCTTTGAGGAACAAGATGAATATGAATTATCTGATAATGAGTTGGCAAAAACTAATTTAATTGTAAGAGTTGATCATGATGGTGAGCAACAAGTTGAAGACAGACATCATAGTGAGGGAGAAGCCAATAATGACGAGTTCACTTTTTTCAAGCATAAAATTAAAAGCTTAGTTTAA 1722 0.378 MLKRVFFSCLWVFYGSLLSMAVSDSNESSRELDQTPTWAVAAVCTVFILISIAHEKSLHKLGTWLGKRQKKALLEALEKVKAELMILGFISLLLTIGQNYIVRICISEKVADKMLPCPLKNISDNKESSSDEVRHLRKLVSYERRYLSSDTTSYKCSRKGHEPLLSVNGLHQLHILIFFLAVFHVFYSAVTMLLGRLKIRGWKAWEEEASNNGYDNGAARFRLTHETSFVRAHTSFWTRVYISFYIGCFFRQFYRSVRKVDYQTLRNGFINVHLAPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASAVVFLLLNIDGWRTPLWAFLIPIIIILAVGTKLQVILARMALDITERHAVVQGMPLVQGSDRYFWFGQPQFVLHLIHFALFQNAFQITYILWTWYSFGLENCFRLDLKLAIIKVAFGIVMLCLCSYITLPLYALVTQMGSRMKKSVFDEQTSKALKKWHMTVKKKQRTVKLGKSTIGTIDGSTIGSTMQSPGPALHRFKTTGHSTRSSTFEEQDEYELSDNELAKTNLIVRVDHDGEQQVEDRHHSEGEANNDEFTFFKHKIKSLV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01406 573 Pfam Mlo family 30 485 IPR004326 GO:0006952|GO:0016020
Trre10g01406 573 PANTHER MLO-LIKE PROTEIN 1 28 515 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01406 Trre-Chr10 11819181 11824531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01406 30 566 MLO family AT2G17480 60.109 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01406 K08472 - gmx:100790155 830.861