Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01396 ATGGTACTATTTTCAGGAAAACAGCATGGTTGGGAAAACCCTAAAAAAGACTTAGGCTATAACATAGGCATTCTTTCAGGCCTACTCAATGAAATAACACCCCCTTGGGTTGTCTTAACAATTGGTGGAATTCTAAACTTTTTTGGCTATTTCATGACATGGCTTGCAGTCACAAGAAAAATTCCTAAACCACCAATATGGAATATGTGTTTATACATAATCATTGGTGCAAATTCTCATTGTTCAACCAACACTGGAGTTATAGTTACAAGTGTAAAGAACTTCCCTGGTAGTAGAGGTGTTGTCATAAGTCTTTTGAGTGGTTATCTTAGTTTGAGTGGAGCTATCATAACTCAACTATACTATGCTTTCTATGGAAATGACTCAAAATCTTTAATTTTGTTTATGGCTTGGTTACCAACTGTTGTGACTTTTGTTTTTATGCCATTTATTAAACATCATAAGATGGCTCAACAACCAAATGATTCCAAAGCTTTCTATAATTTCCTTTACATGACTTTAATCCTTGCAGGGTTCCTCATGATAATGATCATAGTGCAAAATTGTTTCAACTTCACAAAAAGTGAGTATTATGTCACTTCCGCGTCGATGCTTCTCTTGCTCATCATCCTTCCTCTTATTGTTGTTATCATGGAAGAACAAAGGATTTTGCATGTTAATGTAGCTACTACACAGATGCCACCAAATCCAGAAGAGAAGAATCTCCAATCCTCTTGTCGAGGTGAAGATCATACAACACTTGAAGCCATTTTCAGCCTTGACATGTTGACTCTATTTGTAGCAACAATTTGTGGACTTGGTGGAACACTTACTGTGGTAAATAACTTGAGTCAGATTGGATTATCTTTAGGATATCCTGCACATAGTATAACAACATTTTTGTCTCTAATGGCAATTTGGATTTATCTAGGTCAAGTTACACAAGGGGTTATCTCAGAATTTATCATAACAAAGTTAAAACTCCCTAGGCCTCTAATGTTGACATCAATCCTTATATTATCTTGTTTTGGTCACCTTCTAATTGCATTTAATGTTCCAAATGGTCTCTATGTAGCATCAATTATTATTGGTTTTTGCTTTGGAGCAAACTGGCCAGTACTATTTTCAATCATATCTAAACTATTTGGTCTTAAATATTACTCAACTTTGTTCAATGTTGGGTCAATAGCAAGTCCAATTGGGTCATACTTGTTAAGTGTAAGGGTTGCTGGTTACTTGTATGACAAGGAAGCCACAAGACAAATGGAAATATTTGGACTAAAGAGGAAGCAAGGGGAGGAGTTGAATTGCAATGGGACTCAGTGCTACAAATTCAGCTTCAACATGATGCTCAAATTCACTTGGGAGAGTTGGATGTGA 1380 0.3601 MVLFSGKQHGWENPKKDLGYNIGILSGLLNEITPPWVVLTIGGILNFFGYFMTWLAVTRKIPKPPIWNMCLYIIIGANSHCSTNTGVIVTSVKNFPGSRGVVISLLSGYLSLSGAIITQLYYAFYGNDSKSLILFMAWLPTVVTFVFMPFIKHHKMAQQPNDSKAFYNFLYMTLILAGFLMIMIIVQNCFNFTKSEYYVTSASMLLLLIILPLIVVIMEEQRILHVNVATTQMPPNPEEKNLQSSCRGEDHTTLEAIFSLDMLTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFLSLMAIWIYLGQVTQGVISEFIITKLKLPRPLMLTSILILSCFGHLLIAFNVPNGLYVASIIIGFCFGANWPVLFSIISKLFGLKYYSTLFNVGSIASPIGSYLLSVRVAGYLYDKEATRQMEIFGLKRKQGEELNCNGTQCYKFSFNMMLKFTWESWM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01396 459 Gene3D MFS general substrate transporter like domains 202 426 IPR036259 -
Trre10g01396 459 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 450 - -
Trre10g01396 459 SUPERFAMILY MFS general substrate transporter 24 154 IPR036259 -
Trre10g01396 459 SUPERFAMILY MFS general substrate transporter 167 416 IPR036259 -
Trre10g01396 459 Pfam Nodulin-like 16 217 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01396 Trre-Chr10 11552406 11553785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01396 16 447 Nodulin-like Gene Family AT2G39210 57.082 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01396 - - gmx:100789645 645.195