Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01387 ATGGCTAAGAAGGTCCATGCTCACAAGAGACATCATCATGTTGATTCTGAAACTCCTCGAAATAGTCTAGATCTGCAAGAAGAAACATCTCAGAAGTACGGTCCACAAGGAGAATTACCGCACTATTATCAAGTAGAAGATGACTGGTCTGAAAATAATCGATATTCAAACGCGGGTTCTATGAAAAAGCTGATTAATGAAGAGCTATCGACACGATCAAGCACCAGACAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCGGTAGACACTAAATATGTCGCTCCATCGGATAAAAAAATAAATGAAAATATCGGGAAGAAGTTTTCAAACAAGGGAACAAATGAAAGGAGTTCAGTTAGTTTGGAATGTTCCAACTTTAATTCTTCTAGCCATGTTGAATTTGATTCATTTCACAAAGTCGTAGAGGATGACAATGATGATGGATGGGGTCGGAGTTTTGGAAAACCAACGCGACGAGAACATCCACAGGAAGAAGAACTGCAGAAATTTAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAGGAATGTTCAAAGTTCGCTGAAATCGGAAGTGTTTCTAACCGATTGATTTTTGAAGAGAACCTGAACAAGGAAAAGGTTGCAGTTGCAGCGCATAATACAAGTATGCAAAGAAAAGTTTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAAGATTCCTTAATGTTGAAATCTTATAACAGATTAGACACGTCTTCTCCAACCCGAATAGTTATCTTGAAGCCTGGTCCTGATAGCATCTTTAATCATGAAGAGAATTGGACCAATTCATCGGGAACTTTACAAGGGAGACATAGTATAGAAGATTTTCTCGAGGAGGTGAAAGAGCGGTTGAAATGTGAACTCCAAGGAAAAACTGTCGGAAAAGGTTTTGCGGTCCGAGGAAATGAAATTGAGATACTACGCAATAAAAAACCATCTGATCCTAAACTTATCGCTCGTCAAATAGTAAAGCAAGTCAAAGAAAATGTGACTAGAGATTCTGACTCAAATTCGGTCGGCTCAGAATCAACAAGATCATACAATGGTGAAATGCAGTTCAATGGACCAAGTTTCAACGGATATATCAGTAGAGATTCAAGGAGTTACTTGTCAGAGAAGCTAACAAATGTTGTAAAAAGTGAAAGACATGATGATTTTGAGGCGAACTCGAGATCAAATGCATTTGAAAATGACAGAGTTAGACTCAAGAAGACAGAAGATGTTTTGAAAAGTGCAAATGATTGGGAAATATCAAAAGAAGAAACAGAAATACAAACAGGATCTTTCAGGCATGAACAAGATAACAACATATTTTTCCACAGGGAGTTATGGTCTCCAAGGAACCTTGTAAGGTCCTTTTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGACACATTTTAACCGGTGCTCATATTCGAAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTTAAAAAACAGAAAAAAGAGAGGTTTAATAATATTAAAGAAAAGGTCTCCAATTTTAGATACAGTTTTGCTCTAAGAGGGAGGATTTTTGGCAAGAGGAATCAATCAATGGTAGAATCACATGGCAATGAATACCGTCCAACAATGAGAGATATCACAAGTGGTCCGACAGTTCTTATGAACTGCGGCGGCGAGAGACATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAAGCGAGCCGAATATATAAGTCCAATATCAACTCCTGATTTGTCGTCAAGAGATGATACCGTTATGCCACAAGTTTTCAGAGACATCAGCTCTGGTTTAAATGAGCTAAGAAGACAACTGAATCAACTCGATTCTGATGATGTTGAGGACTTCACTATGAAACAAGAACCTTCTGAGTCTGAATTTGTGCAATTAAATGATCCTGCAGAATCTTACATAAGAGATTTACTTGTTGCTTCTGGTCTATACTTTGGTTCTTGGGATAAACCTTTGTTAAGAGGCGACACATATGCAAAGCCTATCGGAAATTCTGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGATCAAAGAGAATGATGAAAATTTTATCAAGAATCATAAGCTAGACCACAGGATTTTGCTTGATTTGTTAAACGAGTCGCTTTCAATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAAGAAAAAATCATGCAACTCTTCAATGCTAGCGCTGCCTCAAGGAAAGGAACTATTGAAATTAGTATGGGACAATATCCGCGTTTCGTTGTATCCATCATCTGATATATCTCATTATTCACTCGATACTTTGGTGTCTCAACACTTGAGTTCAATACCTTGGTCCGGCATAATCAACGACGAGATCAATATATTGGAAAGAGAGATAGAATGTCGTATAACTAATGATCTTGTCGAAGAACTCACAAAGGATTTGCTCTGA 2526 0.3828 MAKKVHAHKRHHHVDSETPRNSLDLQEETSQKYGPQGELPHYYQVEDDWSENNRYSNAGSMKKLINEELSTRSSTRQNAPSIVARLMGIDMMPVDTKYVAPSDKKINENIGKKFSNKGTNERSSVSLECSNFNSSSHVEFDSFHKVVEDDNDDGWGRSFGKPTRREHPQEEELQKFKKEFEAYQAARFQECSKFAEIGSVSNRLIFEENLNKEKVAVAAHNTSMQRKVFPSKSRTLSRDFEDSLMLKSYNRLDTSSPTRIVILKPGPDSIFNHEENWTNSSGTLQGRHSIEDFLEEVKERLKCELQGKTVGKGFAVRGNEIEILRNKKPSDPKLIARQIVKQVKENVTRDSDSNSVGSESTRSYNGEMQFNGPSFNGYISRDSRSYLSEKLTNVVKSERHDDFEANSRSNAFENDRVRLKKTEDVLKSANDWEISKEETEIQTGSFRHEQDNNIFFHRELWSPRNLVRSFSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKQKKERFNNIKEKVSNFRYSFALRGRIFGKRNQSMVESHGNEYRPTMRDITSGPTVLMNCGGERHENYTEVPPSPASVCSSVHEDFWKRAEYISPISTPDLSSRDDTVMPQVFRDISSGLNELRRQLNQLDSDDVEDFTMKQEPSESEFVQLNDPAESYIRDLLVASGLYFGSWDKPLLRGDTYAKPIGNSVFEEVEESHKKLIKENDENFIKNHKLDHRILLDLLNESLSIVLGPPLTLSRFKKKSCNSSMLALPQGKELLKLVWDNIRVSLYPSSDISHYSLDTLVSQHLSSIPWSGIINDEINILEREIECRITNDLVEELTKDLL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01387 841 MobiDBLite consensus disorder prediction 349 369 - -
Trre10g01387 841 MobiDBLite consensus disorder prediction 1 41 - -
Trre10g01387 841 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 840 - -
Trre10g01387 841 MobiDBLite consensus disorder prediction 346 369 - -
Trre10g01387 841 Pfam DUF761-associated sequence motif 77 93 IPR032795 -
Trre10g01387 841 Pfam Domain of unknown function (DUF4378) 670 835 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01387 Trre-Chr10 11480466 11483663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01387 61 840 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.491 1.14e-149 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01387 - - gmx:100789616 1157.51