Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01368 ATGGATTCCTCGCTCACTACCCTACTTCTCTTCAACAACACCATTCAACCAGAGTTGATGAGAAGCGTGCATGTGTACCGTAGTGAATGTGATGGAGAAGGAGAAGGAGAAGAAAGAGAAGTTGAAAGAGAGTTTTTGTTTTCTGAGAATGGTTCTTATGTTGAAATGCAAGCTACTCCAATTCTTAGGTTGTTGAAATCTTTTGTTTCTCAAGAAATTTTTGAAGGGTATACTAATGGAGTGTGGCTTTGTATTTTTGCTTTTCATGCTTATAATACTCCTCCATTTTCTCACATTCCAACACTTTTGTTGGTTACAAGAAATCCAAAGCTTCAGGCTATTCCAAACTTGCTCAATGATCTCCACATGATATTCAAGTTGGTCCCGAAGGAGGAACACAGAGATACACCAGAGAGCTCTACAGCGGAAGAATCGAAAGGAAACAACGACAATTTCCAGCCACCAAAAAAAGTCTTTCCTGTGCTTAATCAGGATCTCAATTGTCTTCCTTTTGAAGAAGACGAGTCTGAGTTACTGGATGAAAAGTCTGAGTTACCGGATGACGAGACAGATTTTGAAAGTTCATCAGGTTCGGTAGGAAAGAAAAGGAGGGCAGCTAGTGACATTGTTGCAAAAATAACTTTATCGGATTTGGTCAAGTACTTTGATATGCCAATTGTAGAAGCGTCAAAGAAGCTAAACATTGGCCTTACTGTTCTCAAAAGAAAGTGCAGAGAATTCGGTATTCCCCGCTGGCCTCACAGGAAGATCAAATCACTTGACAGTCTCATTCACGATCTTCAGGAAGAGGCGAAACATCGGGAAATGGAGGATAAAGCTGCAGCAATGGCAGTGATAAGGAGACAAAAGATGTTGGAATGTGAAAAGGAAAACATAGAGAAGATGCCTTTCATGGACATACAAAGTGAGACTAAGAGATTCAGACAAGATGTTTTCAAGAGAAGGCACAGAGCTAGAGTTATGGAAAAACAGAATTCAACAGTAGCAAGCAATTAG 1017 0.4012 MDSSLTTLLLFNNTIQPELMRSVHVYRSECDGEGEGEEREVEREFLFSENGSYVEMQATPILRLLKSFVSQEIFEGYTNGVWLCIFAFHAYNTPPFSHIPTLLLVTRNPKLQAIPNLLNDLHMIFKLVPKEEHRDTPESSTAEESKGNNDNFQPPKKVFPVLNQDLNCLPFEEDESELLDEKSELPDDETDFESSSGSVGKKRRAASDIVAKITLSDLVKYFDMPIVEASKKLNIGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKHREMEDKAAAMAVIRRQKMLECEKENIEKMPFMDIQSETKRFRQDVFKRRHRARVMEKQNSTVASN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01368 338 ProSiteProfiles RWP-RK domain profile. 195 280 IPR003035 -
Trre10g01368 338 MobiDBLite consensus disorder prediction 179 199 - -
Trre10g01368 338 MobiDBLite consensus disorder prediction 132 154 - -
Trre10g01368 338 Pfam RWP-RK domain 212 260 IPR003035 -
Trre10g01368 338 PANTHER PROTEIN RKD4 21 326 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01368 Trre-Chr10 11310999 11314057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01368 15 338 AtRKD Transcription Factor Family AT4G35590 48.494 5.84e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Trre10g01368 RWP-RK 2.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01368 - - gmx:100306328 459.529