LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre10g01355	ATGGACCAAAATGTTTCTAACAACCCAACTTCAACAAACAACAACTCATCTGCGTCCAATACCCCCACAAACACCCCCGATGAAACAAACCCTACCGGGGAGGGTTTTGAAACAATCGCGAAAACCTTTGAAGATGAGACCAATAGAAACAGCACTGGTGGAAATAATGAAGATGATGGGGTTCCTAGGTCTATGTTTGTAGCTTTGATTCCGGATGGTTCGAATACATCTGTGGTGGAGCAAGTTGGTGGAAATAATCATGTTAAGAAGAGAAAGTACAAACTAGTTAGTGACCCTCCTGTTGGAATTATACCTAATTGTCCAGTATGTAGGATGGAGTTTGCAACATGGAGAGCTACATTTGGGCATATCAACAAGCATCCTGAGCGTCCGTACCGTGGATTCTTTCCTCCTCCTACTTTTACCCCCATTGCACCGCTGACTGGGATCCGTGATGTTGAGGACAATGGTTGTCGTAACAAGGTGGATGAAGGGGAGTTAGGAATGGTTTGTAAACTTGTCATAGATCTGAATAGGTCTATCGGAGCACCAACAGAGTCCTCCAACGCTGGTGATAGCAGTGGGAGTGGGAGAAATGCAGAAGCACCTACCCCGATGCCTAAAAATGAAGAGGGCAAAAGGAAAAATGTGTTTGACTTGAACAAATTACCTCCGAATGATGACAACGACGATGAAGCTGAAGAGAAGGGAATATAA	717	0.4435	MDQNVSNNPTSTNNNSSASNTPTNTPDETNPTGEGFETIAKTFEDETNRNSTGGNNEDDGVPRSMFVALIPDGSNTSVVEQVGGNNHVKKRKYKLVSDPPVGIIPNCPVCRMEFATWRATFGHINKHPERPYRGFFPPPTFTPIAPLTGIRDVEDNGCRNKVDEGELGMVCKLVIDLNRSIGAPTESSNAGDSSGSGRNAEAPTPMPKNEEGKRKNVFDLNKLPPNDDNDDEAEEKGI	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre10g01355	238	MobiDBLite	consensus disorder prediction	1	36	-	-
	Trre10g01355	238	MobiDBLite	consensus disorder prediction	182	238	-	-
	Trre10g01355	238	MobiDBLite	consensus disorder prediction	207	229	-	-
	Trre10g01355	238	MobiDBLite	consensus disorder prediction	1	62	-	-
	Trre10g01355	238	MobiDBLite	consensus disorder prediction	182	200	-	-
	Trre10g01355	238	PANTHER	ZINC FINGER PROTEIN ZAT2-RELATED	7	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre10g01355	Trre-Chr10	11143088	11144666	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre10g01355	107	141	C2H2 Transcription Factor Family	AT4G35280	48.571	6.78e-07	47.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre10g01355	-		K17608	tpra:123904233	228.794