Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01303 ATGATAATTCGTCGTGATTATCAACTTCAAAGTATAATTTCATTTCTATTCATTCATTCATTCATTCATAAAAAAGATAACCACTCGTTTGCATTTGGTAGTATCCATATACTCTATCTAATATCTATTGTGTATAGAGTTGGATCAGGGATGACAAAGAACAGCAATTTTGTTAAAGAAGTCTCCTCACAATTTAGAAAAGAAGATGAAATTATTGTTGGATGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTACCGACTTGTTAGCTTCTGGATTCACTGGACTAACAGACATAGCTGGTGGTTATGCTGCTTGGACCCAAAATGGACTTCCTACAGAACAATGA 348 0.3506 MIIRRDYQLQSIISFLFIHSFIHKKDNHSFAFGSIHILYLISIVYRVGSGMTKNSNFVKEVSSQFRKEDEIIVGCQLGKRSMMAATDLLASGFTGLTDIAGGYAAWTQNGLPTEQ 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01303 115 Gene3D - 23 114 IPR036873 -
Trre10g01303 115 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 40 114 - -
Trre10g01303 115 Pfam Rhodanese-like domain 51 108 IPR001763 -
Trre10g01303 115 CDD RHOD 59 106 - -
Trre10g01303 115 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 46 114 IPR036873 -
Trre10g01303 115 ProSiteProfiles Rhodanese domain profile. 66 115 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01303 Trre-Chr10 10779772 10781507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01303 51 114 Sulfurtransferasese or Rhodanese AT5G66040 60.938 1.69e-25 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01303 - - aprc:113868825 140.584