Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01275 ATGTTGATGAATACTCGTTCTACTTTTGGTGGTGTTATTCTTCAAGATTTTCTTACTAGACCCCTTGACTTAGACCCACCACCAAAAAGCATAGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCTGATCAAAACAACAACAATAATAATACTAATAATGGTTCTTTTTATTGTTCTGCCCCACCACCACCACCACCACCACCACTTGTCACTGCTCTTAGTTTGAACTCTCATCATCCTGATTTTCACTTTGACCCTCTTATCAGACAAACCAAACAAAATAATTCTGATCAGTTACTACTTCATCATCAGCAGCAACAACATCAACAACAGCAACAAAATGTTTCTGGTTGTTTTGTTAATCCTTCATCTTATGAACAAAATGTGGGTGTTGGTTCTAATTCTTTCACTTGTTTTGGGAAGAGGTTTGGTGAACCTGATATTAGTCCTGGTGAAAGAAGAAATAAGAGAATGATCAAGAATAGAGAATCTGCTGCACGTTCAAGAGCTAGAAAACAGGAAAAGATTGCTTACACAACTGAACTAGAACAAAAAGTTGAACTATTACAAGAAGAAAATGCAAGACTTAAAAGACAACAAAAAGAGTTATTTGAAGCAGAAATTAGTGTTCAACAAAAGAAGAAAAATAGCTTATATCGAACATCAACAATTTAA 681 0.3436 MLMNTRSTFGGVILQDFLTRPLDLDPPPKSIDYSSNNSSSSVASDQNNNNNNTNNGSFYCSAPPPPPPPPLVTALSLNSHHPDFHFDPLIRQTKQNNSDQLLLHHQQQQHQQQQQNVSGCFVNPSSYEQNVGVGSNSFTCFGKRFGEPDISPGERRNKRMIKNRESAARSRARKQEKIAYTTELEQKVELLQEENARLKRQQKELFEAEISVQQKKKNSLYRTSTI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01275 226 SMART brlzneu 151 218 IPR004827 GO:0003700|GO:0006355
Trre10g01275 226 MobiDBLite consensus disorder prediction 30 59 - -
Trre10g01275 226 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 205 IPR004827 GO:0003700|GO:0006355
Trre10g01275 226 CDD bZIP_plant_BZIP46 155 205 - -
Trre10g01275 226 Pfam bZIP transcription factor 155 207 IPR004827 GO:0003700|GO:0006355
Trre10g01275 226 SUPERFAMILY Leucine zipper domain 155 207 IPR046347 GO:0003700|GO:0006355
Trre10g01275 226 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 223 IPR043452 GO:0003700|GO:0045893
Trre10g01275 226 Gene3D - 153 209 - -
Trre10g01275 226 MobiDBLite consensus disorder prediction 28 70 - -
Trre10g01275 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 158 173 IPR004827 GO:0003700|GO:0006355
Trre10g01275 226 Coils Coil 181 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01275 Trre-Chr10 10467995 10469332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01275 154 205 bZIP Transcription Factor Family AT3G56850 75.000 1.12e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre10g01275 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01275 K14432 - qsu:112005648 112.079