Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01274 ATGGAAGAAGTTTGGAAAGACATAAACTTATCTTCATTGAATGACCAAAACACAAGACCTATGTTGATGAATACTCGTTCTACTTTTGGTGGTGTTATTCTTCAAGATTTTCTTACTAGACCCCTTGACTTAGACCCACCACCAAAAAGCATAGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCTGATCAAAACAACAACAATAATAATACTAATAATGGTTCTTTTTATTGTTCTGCCCCACCACCACCACCACCACCACCACTTGTCACTGCTCTTAGTTTGAACTCTCATCATCCTGATTTTCACTTTGACCCTCTTATCAGACAAACCAAACAAAATAATTCTGATCAGTTACTACTTCATCATCAGCAGCAACAACATCAACAACAGCAACAAAATGTTTCTGGTTGTTTTGTTAATCCTTCATCTTATGAACAAAATGTGGGTGTTGGTTCTAATTCTTTCACTTGTTTTGGGAAGAGGTTTGGTGAACCTGATATTAGTCCTGGTGAAAGAAGAAATAAGAGAATGATCAAGAATAGAGAATCTGCTGCACGTTCAAGAGCTAGAAAACAGGAAAAGATTGCTTACACAACTGAACTAGAACAAAAAGTTGAACTATTACAAGAAGAAAATGCAAGACTTAAAAGACAACAAAAAGAGTTATTTGAAGCAGAAATTAGTGTTCAACAAAAGAAGAAAAATAGCTTATATCGAACATCAACAATTTAA 741 0.3428 MEEVWKDINLSSLNDQNTRPMLMNTRSTFGGVILQDFLTRPLDLDPPPKSIDYSSNNSSSSVASDQNNNNNNTNNGSFYCSAPPPPPPPPLVTALSLNSHHPDFHFDPLIRQTKQNNSDQLLLHHQQQQHQQQQQNVSGCFVNPSSYEQNVGVGSNSFTCFGKRFGEPDISPGERRNKRMIKNRESAARSRARKQEKIAYTTELEQKVELLQEENARLKRQQKELFEAEISVQQKKKNSLYRTSTI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01274 246 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 243 IPR043452 GO:0003700|GO:0045893
Trre10g01274 246 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Trre10g01274 246 MobiDBLite consensus disorder prediction 50 79 - -
Trre10g01274 246 SMART brlzneu 171 238 IPR004827 GO:0003700|GO:0006355
Trre10g01274 246 Pfam bZIP transcription factor 175 227 IPR004827 GO:0003700|GO:0006355
Trre10g01274 246 CDD bZIP_plant_BZIP46 175 225 - -
Trre10g01274 246 Gene3D - 173 229 - -
Trre10g01274 246 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 225 IPR004827 GO:0003700|GO:0006355
Trre10g01274 246 SUPERFAMILY Leucine zipper domain 175 227 IPR046347 GO:0003700|GO:0006355
Trre10g01274 246 MobiDBLite consensus disorder prediction 45 99 - -
Trre10g01274 246 Coils Coil 201 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01274 Trre-Chr10 10467995 10469392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01274 1 199 bZIP Transcription Factor Family AT2G17770 36.098 7.53e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre10g01274 bZIP_1 3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01274 K14432 - qsu:112005648 133.65