Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01259 ATGGAGAAACATGAAACACAAAATTGGTTTGAAAGAGCAAAACCATTCATAGCAGTTGTGCTTTTGCAATTTGGATATGCAATTATGGACGTTTTATCAAAGGCTGCAATGAATAAAGGAATGAGCAATTATGTATTTATTGTGTATCGCCATGTTGTAGCATTCATTTTCATAACCCCTTTTGCACTCTATTTTGACAATTATAAATATAAGAAAGTTAGGACTAAAATGACAATGTCAATCTTCATGAAGATAGTGTTGCTCAGCTTTCTAGAACCTGTTATTGGTCAAAATTTGTATTTTTTAGGGATGAAGTATACTACAGCAACCTTTGCAGCTGCCATGACTAATATCCTTCCTGCCAGTGCCTTTATCTTGGCGTGCATGTTTAGGCTTGAGATGATAAAGGTAAAAAGTATAAGGAGCCAAGCAAAAGTGGTGGGAACCATAGCATCTGTTTCAGGTGCAATGGTCATGACTCTTATTAAAGGTCCTGTACTTTTAGGGACATTTGGAGGCAATAGTCATAACCAATATAGTGATGAGACCAATACTCAACATATAGTAGCCGGCTCTATAATGATTGCATTAGGATGCTTTAGTTGTGCTTGTTTTGTGATCCTTCAAGCTATTACCCTTAAAACCTATCCTGCACCACTCTCTCTTGCCTCGTGGATATGTTTTTTGGGCACACTTGAAACTGCAGTAGTGGCTATGATTATGGAATGGTGTAATCCTTCAGTTTGGTATATAAAATGGGATATGAGATTGTTGTCTATTGTTTATACTGGTATAGTTTGCTCAGGAGTGTTATATTTTGTGCAAGGAGTAGTGGTGAAATCTAGGGGCCCAGTATTTGTAACAGCTGTTAGTCCTTTATGCACAGTAATTGTTGCAATCATGGGATACTTCATTTTGGCTGAAGAATTGTTCCTTGGAAGGGTAATGGGTGCAATTATTACTTGTCTGGGCCTATATCTTGTTGCTTGGGGCAAAAGCAAAGATTACACTCCATCAGATCCAGTTATTCAAGAATTTATATTTTCAACCGATGAAGGCAATGTTAAGAATGAACATTTTGCTCAAGAGATCGTCACTATTCAGTAA 1107 0.3713 MEKHETQNWFERAKPFIAVVLLQFGYAIMDVLSKAAMNKGMSNYVFIVYRHVVAFIFITPFALYFDNYKYKKVRTKMTMSIFMKIVLLSFLEPVIGQNLYFLGMKYTTATFAAAMTNILPASAFILACMFRLEMIKVKSIRSQAKVVGTIASVSGAMVMTLIKGPVLLGTFGGNSHNQYSDETNTQHIVAGSIMIALGCFSCACFVILQAITLKTYPAPLSLASWICFLGTLETAVVAMIMEWCNPSVWYIKWDMRLLSIVYTGIVCSGVLYFVQGVVVKSRGPVFVTAVSPLCTVIVAIMGYFILAEELFLGRVMGAIITCLGLYLVAWGKSKDYTPSDPVIQEFIFSTDEGNVKNEHFAQEIVTIQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01259 368 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016020|GO:0022857
Trre10g01259 368 Pfam EamA-like transporter family 17 159 IPR000620 GO:0016020
Trre10g01259 368 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Trre10g01259 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 138 - -
Trre10g01259 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01259 Trre-Chr10 10329015 10332095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01259 1 368 Nodulin-like Gene Family AT2G37460 55.585 2.06e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01259 - - gmx:100811147 491.115