Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01258 ATGACCAAGTTACTCTTTCAAAACCTTCTTTGTCAATCACCTTTTGTCAATCTTTTCTCTCTTACTACAATCCTTATCTATCTACATTATGGTAATGCTATGAATCTACCAAACAATGAAACAGTTCCAGCACTCTTTGTGTTTGGTGACTCTGTTGTTGACTCAGGTAATAACAACTACATCAATACCATTGCCAGGTGCGATTTTCTACCTTATGGTAAAGACTTTGGTGGTGGAAATCAACCAACTGGAAGATTCAGCAATGGTTTAATCCCTTCAGACATCATTGCTTCAAAACTTGGAGTCAAGAAGCTTTTACCAGCTTCTCTTGATCCAAATTTGCAACTTCAAGATCTTCTAACAGGTGTAAGCTTTGCCTCTGGTGGTGCTGGATATGATCCTCTAACTTCTCAATTAGCGTCTGTGATATCATTGTCAGATCAATTGGACATGTTCAAGAAGTACAAAAATAAGATAAATGAATCAATTGGAGAAGAGAGAATGAACATGATAATATCAAAGAGTGTATATATTATTTGCATAGGAAGTGATGACATTGCCAATACTTATACTCAAACCCCATATAGGAGATTCAACTATAATATTCCATCATACACAGACTTATTGGCTTCACATGCCTCAAACTTCTTGCAGGAACTATATGGTTTAGGAGCTAGAAGAATTGGAGTATTAGGTATGCCAAATATAGGGTGTGTGCCCTCACAGAGAACAATTGATGGAGGCATGAATAGAGGATGTTCAGAATCTGAAAACCAAGCAGCTAGACTCTTCAACTCCAAATTAGTATCTCAATTGGATTCCTTTCAAAATAAATTTCCAGAGGCTAAGTTTGTTTATCTTGACATTTACAATCCATTAATGAATATGGTTCAAAATCCTGCTAAATATGGTTTTGAAGTAGCAGACATTGGATGTTGTGGAACAGGAGACATAGAAGTAGGCATATTGTGTAACCGTTACAGTTTAGACATATGTTCAAACCCTTCAAGCTATATATTTTGGGACAGTTACCATCCTACACAAGAGGCATATAATTTGCTTTGTTCAATGGTCCTTGATGACAAAATCAAACACTTCTTCTAG 1104 0.3623 MTKLLFQNLLCQSPFVNLFSLTTILIYLHYGNAMNLPNNETVPALFVFGDSVVDSGNNNYINTIARCDFLPYGKDFGGGNQPTGRFSNGLIPSDIIASKLGVKKLLPASLDPNLQLQDLLTGVSFASGGAGYDPLTSQLASVISLSDQLDMFKKYKNKINESIGEERMNMIISKSVYIICIGSDDIANTYTQTPYRRFNYNIPSYTDLLASHASNFLQELYGLGARRIGVLGMPNIGCVPSQRTIDGGMNRGCSESENQAARLFNSKLVSQLDSFQNKFPEAKFVYLDIYNPLMNMVQNPAKYGFEVADIGCCGTGDIEVGILCNRYSLDICSNPSSYIFWDSYHPTQEAYNLLCSMVLDDKIKHFF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01258 367 PANTHER GDSL ESTERASE/LIPASE EXL3 24 356 - -
Trre10g01258 367 SUPERFAMILY SGNH hydrolase 44 360 - -
Trre10g01258 367 FunFam GDSL esterase/lipase APG 34 363 - -
Trre10g01258 367 Pfam GDSL-like Lipase/Acylhydrolase 45 354 IPR001087 GO:0016788
Trre10g01258 367 Gene3D SGNH hydrolase 30 362 IPR036514 -
Trre10g01258 367 CDD SGNH_plant_lipase_like 43 361 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01258 Trre-Chr10 10326262 10328451 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01258 39 361 Pollen Coat Proteome AT1G75910 39.571 3.98e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01258 - - gmx:100810354 541.191