Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01256 ATGTTCAAGGAGTACAAAAATAAGATAAAGGAAGAAGTTGGAGAAAATAGAATGGAAATAATAATATCAAAGAGTGTATACATTATTTGCATAGGGAGTAATGACATTGCTAATACTTATGCTCAAACACCATATAGGAGAATAAACTATGATATTCCATCATATACAGACTTATTGGCTTCACATTCCTCAAACTTCTTGCAGGAACTATATAGTTTAGGAGCTAGAAGGATTAGAGTAATTGGTATGCCATATATAGGTTGTGTGCCCTCACAAAGAACACTTGGAGGAGGCAGAGAGAGAGCATGTTCAGATTTTGAAAACCAAGCTGCAAAACTTTTCAACTCTAAATTAGTATCTCTAATGGATGCATTTGAAAACAAATTTCCAGAGACTAAGCTTGTCTACCTTGATATTTACCATCCATTAATGTATATGGTTCAAAACCCTGCTAAATACGGTTTTGATGTAGCAGATAGAGGATGTTGTGGGACAGGAGACATAGAAATAGGCATATTGTGTAACCATTACGGCTCAAGCATATGTTCAAATTCTTCAAGATATATATTCTGGGACAGTTACCATCCAACACAGGAGGCTTATAACTTGCTTTGTTCTATGGTCCTTGATGGCAAAATCAAGGACTTCTTCTAA 654 0.3532 MFKEYKNKIKEEVGENRMEIIISKSVYIICIGSNDIANTYAQTPYRRINYDIPSYTDLLASHSSNFLQELYSLGARRIRVIGMPYIGCVPSQRTLGGGRERACSDFENQAAKLFNSKLVSLMDAFENKFPETKLVYLDIYHPLMYMVQNPAKYGFDVADRGCCGTGDIEIGILCNHYGSSICSNSSRYIFWDSYHPTQEAYNLLCSMVLDGKIKDFF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01256 217 PANTHER GDSL ESTERASE/LIPASE EXL3 1 206 - -
Trre10g01256 217 CDD SGNH_plant_lipase_like 1 211 IPR035669 -
Trre10g01256 217 Gene3D SGNH hydrolase 1 212 IPR036514 -
Trre10g01256 217 Pfam GDSL-like Lipase/Acylhydrolase 22 204 IPR001087 GO:0016788
Trre10g01256 217 SUPERFAMILY SGNH hydrolase 26 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01256 Trre-Chr10 10318310 10320336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01256 2 204 Pollen Coat Proteome AT1G75910 34.466 3.40e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01256 - - gmx:100810354 320.472