Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01238 ATGTTTAGATCCGGAGCAAAGGTTGTTACTATTGATGTGCGAGCAGCCAAGAATCTCATCCAAACCGATCACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGCGAAAGGGCATGTAGATGCAGCTAAGATCATTAACATTCCATACATGTTGGATACACCTAAGGGCAGGGTGAAGAACCCAAATTTTCTAAAGGAGATTTCATCCGTTTGCGATAAAGAAGATCATCTCGTTGTGGGTTGCCAAAGTGGGGTTAGATCTTTGTATGCAACTTCTGATCTTCAATCTGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATGTAGACTGGGTTAGAAACAAGTTTCCAATTAATACATCAGTAGCCAAAGAAGAACTGTAA 390 0.4051 MFRSGAKVVTIDVRAAKNLIQTDHIYLDVRTVEEFAKGHVDAAKIINIPYMLDTPKGRVKNPNFLKEISSVCDKEDHLVVGCQSGVRSLYATSDLQSDGFKNVKDMGGGYVDWVRNKFPINTSVAKEEL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01238 129 Pfam Rhodanese-like domain 17 115 IPR001763 -
Trre10g01238 129 CDD RHOD 15 114 - -
Trre10g01238 129 Gene3D - 3 121 IPR036873 -
Trre10g01238 129 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 7 120 IPR036873 -
Trre10g01238 129 PANTHER THIOSULFATE SULFURTRANSFERASE 18 4 124 IPR044684 GO:0003824
Trre10g01238 129 SMART rhod_4 11 119 IPR001763 -
Trre10g01238 129 ProSiteProfiles Rhodanese domain profile. 20 122 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01238 Trre-Chr10 10188210 10189242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01238 7 122 Sulfurtransferasese or Rhodanese AT5G66170 57.759 2.48e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01238 - K15692 psat:127120138 220.705